RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 KANSL1LA0AUZ9 987 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 IPO13O94829 963 aaKnown RBP10.2□□□□□ -0.78
RFFL-212ENST00000584655 SBK3P0C264 359 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 PKMP14618 531 aaKnown RBP10.2□□□□□ -0.78
RFFL-212ENST00000584655 PTPN2P17706 415 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 PPM1AP35813 382 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 TIGD2Q4W5G0 525 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 BNIPLQ7Z465 357 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 FNDC5Q8NAU1 212 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 DOK4Q8TEW6 326 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 NXPE3Q969Y0 559 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 RELTQ969Z4 430 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 FUBP1Q96AE4 644 aaKnown RBP10.2□□□□□ -0.78
RFFL-212ENST00000584655 CHFRQ96EP1 664 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 ATP13A3Q9H7F0 1226 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 IL26Q9NPH9 171 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 TRAF6Q9Y4K3 522 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 CEP250Q9BV73 2442 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 GLYATL1P3A0A0U1RQE8 302 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 ILVBLA1L0T0 632 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 SEC24DO94855 1032 aaPredicted RBP10.19□□□□□ -0.78
RFFL-212ENST00000584655 CD160O95971 181 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 B3GALT4O96024 378 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 ABCB1P08183 1280 aaPredicted RBP10.19□□□□□ -0.78
RFFL-212ENST00000584655 PCNAP12004 261 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 SRCP12931 536 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 HLA-DPA1P20036 260 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 PTPN4P29074 926 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 HTR6P50406 440 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 KPNA1P52294 538 aaPredicted RBP10.19□□□□□ -0.78
RFFL-212ENST00000584655 IL2P60568 153 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 SH3BP2P78314 561 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 PHKG1Q16816 387 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 RNF43Q68DV7 783 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 PSRC1Q6PGN9 363 aaPredicted RBP10.19□□□□□ -0.78
RFFL-212ENST00000584655 SCUBE1Q8IWY4 988 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 PHC3Q8NDX5 983 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 PIP4K2CQ8TBX8 421 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 ELMO1Q92556 727 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 RAB3IPQ96QF0 476 aaPredicted RBP10.19□□□□□ -0.78
RFFL-212ENST00000584655 OXSMQ9NWU1 459 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 SLC12A4Q9UP95 1085 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 TMEM202A6NGA9 273 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 H3BNC9 293 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 TRAFD1O14545 582 aaPredicted RBP10.19□□□□□ -0.78
RFFL-212ENST00000584655 ALDH1A2O94788 518 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 MPOP05164 745 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 NCK1P16333 377 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 BPIP17213 487 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 ITGALP20701 1170 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 PPP3CCP48454 512 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 DGKQP52824 942 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 CYP4F2P78329 520 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 IMPG1Q17R60 797 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 UAP1L1Q3KQV9 507 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 STEAP4Q687X5 459 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 RAET1GQ6H3X3 334 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 KIAA0930Q6ICG6 404 aaPredicted RBP10.19□□□□□ -0.78
RFFL-212ENST00000584655 SUSD1Q6UWL2 747 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 CCDC149Q6ZUS6 474 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 ZNF683Q8IZ20 524 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 PELI3Q8N2H9 469 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 C2CD4AQ8NCU7 369 aaPredicted RBP10.19□□□□□ -0.78
RFFL-212ENST00000584655 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.19□□□□□ -0.78
RFFL-212ENST00000584655 HTATIP2Q9BUP3 242 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 EBPLQ9BY08 206 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 GGA2Q9UJY4 613 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 MYOCOSA0A1B0GUC4 107 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 UBFD1O14562 309 aaKnown RBP10.19□□□□□ -0.78
RFFL-212ENST00000584655 UBDO15205 165 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 PSMD3O43242 534 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 SLC2A4P14672 509 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 ATP5F1P24539 256 aaPredicted RBP10.19□□□□□ -0.78
RFFL-212ENST00000584655 PIK3R1P27986 724 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 HMOX2P30519 316 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 HALP42357 657 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 KLF10Q13118 480 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 TRIP10Q15642 601 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 ZNF542PQ5EBM4 170 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 TMEM215Q68D42 235 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 ISCA2Q86U28 154 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 LCA5Q86VQ0 697 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 GBP7Q8N8V2 638 aaPredicted RBP10.19□□□□□ -0.78
RFFL-212ENST00000584655 IRF7Q92985 503 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 MTERF1Q99551 399 aaKnown RBP10.19□□□□□ -0.78
RFFL-212ENST00000584655 SEPHS2Q99611 448 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 KIAA1522Q9P206 1035 aaPredicted RBP10.19□□□□□ -0.78
RFFL-212ENST00000584655 FREM2Q5SZK8 3169 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 DMDP11532 3685 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 VWA8A3KMH1 1905 aa10.19□□□□□ -0.78
RFFL-212ENST00000584655 TRPM7Q96QT4 1865 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 SYNDIG1LA6NDD5 238 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 K7ESM1 405 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 HDAC3O15379 428 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 MAPKAPK2P49137 400 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 POLE2P56282 527 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 STX1BP61266 288 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 DBN1Q16643 649 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 AMIGO2Q86SJ2 522 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 OR2AP1Q8NGE2 309 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms