RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 SLC25A12O75746 678 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 CELF2O95319 508 aaKnown RBP12.97□□□□□ -0.33
RNF43-208ENST00000584437 SLC18A1P54219 525 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 CLCQ05315 142 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 MBTD1Q05BQ5 628 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 CKLFQ9UBR5 152 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 SLC9A3R1O14745 358 aaPredicted RBP12.96□□□□□ -0.33
RNF43-208ENST00000584437 OR10H2O60403 315 aa12.96□□□□□ -0.33
RNF43-208ENST00000584437 B4GALT4O60513 344 aa12.96□□□□□ -0.33
RNF43-208ENST00000584437 SCNN1GP51170 649 aa12.96□□□□□ -0.33
RNF43-208ENST00000584437 VBP1P61758 197 aa12.96□□□□□ -0.33
RNF43-208ENST00000584437 CERS6Q6ZMG9 384 aa12.96□□□□□ -0.33
RNF43-208ENST00000584437 SUSD6Q92537 303 aa12.96□□□□□ -0.33
RNF43-208ENST00000584437 TMPRSS4Q9NRS4 437 aa12.96□□□□□ -0.33
RNF43-208ENST00000584437 FKBP14Q9NWM8 211 aa12.96□□□□□ -0.33
RNF43-208ENST00000584437 ATRNO75882 1429 aa12.96□□□□□ -0.33
RNF43-208ENST00000584437 TNS2Q63HR2 1409 aa12.96□□□□□ -0.33
RNF43-208ENST00000584437 AKR1A1P14550 325 aa12.96□□□□□ -0.33
RNF43-208ENST00000584437 GPR1P46091 355 aa12.96□□□□□ -0.33
RNF43-208ENST00000584437 CYP4F8P98187 520 aa12.96□□□□□ -0.33
RNF43-208ENST00000584437 ABRQ12979 859 aa12.96□□□□□ -0.33
RNF43-208ENST00000584437 ECM1Q16610 540 aa12.96□□□□□ -0.33
RNF43-208ENST00000584437 DCST1Q5T197 706 aa12.96□□□□□ -0.33
RNF43-208ENST00000584437 DAW1Q8N136 415 aa12.96□□□□□ -0.33
RNF43-208ENST00000584437 ERMAPQ96PL5 475 aaPredicted RBP12.96□□□□□ -0.33
RNF43-208ENST00000584437 MRIQ9BWK5 157 aa12.96□□□□□ -0.33
RNF43-208ENST00000584437 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.96□□□□□ -0.332e-6■■□□□ 14
RNF43-208ENST00000584437 C12orf65Q9H3J6 166 aaKnown RBP12.96□□□□□ -0.33
RNF43-208ENST00000584437 XYLBO75191 536 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 PRKD3O94806 890 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 MERTKQ12866 999 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 RBM20Q5T481 1227 aaKnown RBP12.96□□□□□ -0.34
RNF43-208ENST00000584437 ZNF730Q6ZMV8 503 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 GLB1L3Q8NCI6 653 aaPredicted RBP12.96□□□□□ -0.34
RNF43-208ENST00000584437 OR5K1Q8NHB7 308 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 AARSD1Q9BTE6 412 aaKnown RBP12.96□□□□□ -0.34
RNF43-208ENST00000584437 MARCH7Q9H992 704 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 ANKRA2Q9H9E1 313 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 PAK6Q9NQU5 681 aaPredicted RBP12.96□□□□□ -0.34
RNF43-208ENST00000584437 CNTN6Q9UQ52 1028 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 PCDHGB3Q9Y5G1 929 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 A0A1W2PQ72 361 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 STK16O75716 305 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 PRPS2P11908 318 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 AZGP1P25311 298 aaKnown RBP12.96□□□□□ -0.34
RNF43-208ENST00000584437 PPP2R2BQ00005 443 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 FUT2Q10981 343 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 ANKRD22Q5VYY1 191 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 CAPN13Q6MZZ7 669 aaPredicted RBP12.96□□□□□ -0.34
RNF43-208ENST00000584437 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.96□□□□□ -0.34
RNF43-208ENST00000584437 STYXQ8WUJ0 223 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 TNFAIP8L1Q8WVP5 186 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 RAD51AP1Q96B01 352 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 FCRL4Q96PJ5 515 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 MCCC1Q96RQ3 725 aaPredicted RBP12.96□□□□□ -0.34
RNF43-208ENST00000584437 CPXM1Q96SM3 734 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 MAT2BQ9NZL9 334 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 GRIP1Q9Y3R0 1128 aa12.96□□□□□ -0.34
RNF43-208ENST00000584437 MEGF6O75095 1541 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 LGR5O75473 907 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 AP1S2P56377 157 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 SLC9A4Q6AI14 798 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 C12orf29Q8N999 325 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 CLHC1Q8NHS4 586 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 TM6SF2Q9BZW4 377 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 SGK2Q9HBY8 427 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 MAGEE1Q9HCI5 957 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 EIF2B3Q9NR50 452 aaKnown RBP12.95□□□□□ -0.34
RNF43-208ENST00000584437 CHRAC1Q9NRG0 131 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 SLC7A8Q9UHI5 535 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 FBXO10Q9UK96 956 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 PRAMEF33A0A0G2JMD5 474 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 PRAMEF10O60809 474 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 ERN1O75460 977 aaKnown RBP12.95□□□□□ -0.34
RNF43-208ENST00000584437 CLDN9O95484 217 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 GBE1Q04446 702 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 TEAD4Q15561 434 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 GPR158Q5T848 1215 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 TCF25Q9BQ70 676 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 ABCG8Q9H221 673 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 ELL3Q9HB65 397 aaPredicted RBP12.95□□□□□ -0.34
RNF43-208ENST00000584437 UPB1Q9UBR1 384 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 TCAF1Q9Y4C2 921 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 BAZ2BQ9UIF8 2168 aaKnown RBP12.95□□□□□ -0.34
RNF43-208ENST00000584437 EFCAB9A8MZ26 197 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 MFSD11O43934 449 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 TBX10O75333 385 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 NR4A1P22736 598 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 ADORA2AP29274 412 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 AQP1P29972 269 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 FOXN2P32314 431 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 OR2B6P58173 313 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 RAET1GQ6H3X3 334 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 FSTL4Q6MZW2 842 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 SLC38A4Q969I6 547 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 COPS4Q9BT78 406 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 NECTIN3Q9NQS3 549 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 FABP12A6NFH5 140 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 IFNA16P05015 189 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 C8BP07358 591 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms