RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 C12orf40Q86WS4 652 aa11.88□□□□□ -0.51
GGA3-217ENST00000583667 DENND6AQ8IWF6 608 aa11.88□□□□□ -0.51
GGA3-217ENST00000583667 OR4K2Q8NGD2 314 aa11.88□□□□□ -0.51
GGA3-217ENST00000583667 OR6P1Q8NGX9 317 aa11.88□□□□□ -0.51
GGA3-217ENST00000583667 RAB3IL1Q8TBN0 382 aa11.88□□□□□ -0.51
GGA3-217ENST00000583667 DNAJC1Q96KC8 554 aaKnown RBP11.88□□□□□ -0.51
GGA3-217ENST00000583667 CCT8L2Q96SF2 557 aa11.88□□□□□ -0.51
GGA3-217ENST00000583667 TNKS2Q9H2K2 1166 aa11.88□□□□□ -0.51
GGA3-217ENST00000583667 SNX15Q9NRS6 342 aa11.88□□□□□ -0.51
GGA3-217ENST00000583667 PLA2G4CQ9UP65 541 aa11.88□□□□□ -0.51
GGA3-217ENST00000583667 VPS9D1Q9Y2B5 631 aa11.88□□□□□ -0.51
GGA3-217ENST00000583667 STARD13Q9Y3M8 1113 aa11.88□□□□□ -0.51
GGA3-217ENST00000583667 ZNF711Q9Y462 761 aa11.88□□□□□ -0.51
GGA3-217ENST00000583667 TEX51A0A1B0GUA7 166 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 AGAP14A8MT82 685 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 GOLGA8TH3BQL2 631 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 GOLGA8RI6L899 631 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 KLF11O14901 512 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 AURKAO14965 403 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 NPC1O15118 1278 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 TRIM24O15164 1050 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 STX7O15400 261 aaKnown RBP11.87□□□□□ -0.51
GGA3-217ENST00000583667 HAUS5O94927 633 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 GOT2P00505 430 aaKnown RBP11.87□□□□□ -0.51
GGA3-217ENST00000583667 IL1BP01584 269 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 C2P06681 752 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 TAC1P20366 129 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 DRD4P21917 467 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 NFKBIAP25963 317 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 GJA4P35212 333 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 HNF1BP35680 557 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 EIF2S3P41091 472 aaKnown RBP11.87□□□□□ -0.51
GGA3-217ENST00000583667 OPRD1P41143 372 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 ABL2P42684 1182 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 SLC6A11P48066 632 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 SUOXP51687 545 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 ST8SIA6P61647 398 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 XIAPP98170 497 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 SEPT7Q16181 437 aaKnown RBP11.87□□□□□ -0.51
GGA3-217ENST00000583667 CCDC153Q494R4 210 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 ACCSLQ4AC99 568 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 RNF187Q5TA31 235 aaPredicted RBP11.87□□□□□ -0.51
GGA3-217ENST00000583667 ZDHHC20Q5W0Z9 365 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 TTC19Q6DKK2 380 aaPredicted RBP11.87□□□□□ -0.51
GGA3-217ENST00000583667 LVRNQ6Q4G3 990 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 CERS6Q6ZMG9 384 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 CDHR3Q6ZTQ4 885 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 GPR155Q7Z3F1 870 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 TRIM42Q8IWZ5 723 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 ANKRD42Q8N9B4 389 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 TERB1Q8NA31 727 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 OR13C4Q8NGS5 318 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 DYDC1Q8WWB3 177 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 EID2BQ96D98 161 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 TSPAN17Q96FV3 270 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 KLF6Q99612 283 aaPredicted RBP11.87□□□□□ -0.51
GGA3-217ENST00000583667 TMEM245Q9H330 911 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 ZFYVE1Q9HBF4 777 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 POPDC3Q9HBV1 291 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 CATSPERZQ9NTU4 200 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 APPL1Q9UKG1 709 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 WASF2Q9Y6W5 498 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 TNRC6BQ9UPQ9 1833 aaKnown RBP11.87□□□□□ -0.51
GGA3-217ENST00000583667 MYO9AB2RTY4 2548 aa11.87□□□□□ -0.51
GGA3-217ENST00000583667 A0A096LPK6 155 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 RGSL1A5PLK6 1076 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 B8ZZF3 427 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 PRRT4C9JH25 899 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 PFDN6O15212 129 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 DKK1O94907 266 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 WISP3O95389 354 aaPredicted RBP11.86□□□□□ -0.51
GGA3-217ENST00000583667 PIGNO95427 931 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 PRKCGP05129 697 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 APOA4P06727 396 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 PIRTP0C851 137 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 HNRNPLP14866 589 aaKnown RBP eCLIP11.86□□□□□ -0.51
GGA3-217ENST00000583667 FOXN2P32314 431 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 GRIA2P42262 883 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 SERPINB4P48594 390 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 STC1P52823 247 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 SEC24CP53992 1094 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 RAB10P61026 200 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 MPP1Q00013 466 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 ENPP2Q13822 863 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 USP10Q14694 798 aaKnown RBP11.86□□□□□ -0.51
GGA3-217ENST00000583667 LRRC14Q15048 493 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 HNRNPA1L2Q32P51 320 aaKnown RBP11.86□□□□□ -0.51
GGA3-217ENST00000583667 FASTKD1Q53R41 847 aaKnown RBP11.86□□□□□ -0.51
GGA3-217ENST00000583667 AARS2Q5JTZ9 985 aaKnown RBP11.86□□□□□ -0.51
GGA3-217ENST00000583667 NUDT18Q6ZVK8 323 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 Q6ZVU0 165 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 USP45Q70EL2 814 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 PTAR1Q7Z6K3 402 aaPredicted RBP11.86□□□□□ -0.51
GGA3-217ENST00000583667 PIGWQ7Z7B1 504 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 ZSWIM9Q86XI8 627 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 RYBPQ8N488 228 aaPredicted RBP11.86□□□□□ -0.51
GGA3-217ENST00000583667 TMIEQ8NEW7 156 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 GRIN3AQ8TCU5 1115 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 BCAS4Q8TDM0 211 aa11.86□□□□□ -0.51
GGA3-217ENST00000583667 PDCD6IPQ8WUM4 868 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms