RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 AVILO75366 819 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 ACAA1P09110 424 aaPredicted RBP4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 SRCP12931 536 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 TRIM21P19474 475 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 APOBEC1P41238 236 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 MMP14P50281 582 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 CLCNKAP51800 687 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 PNLIPRP2P54317 469 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 TAS2R38P59533 333 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 PPP2R2BQ00005 443 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 MYBPHQ13203 477 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 HLFQ16534 295 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 KRTAP27-1Q3LI81 207 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 ATP13A5Q4VNC0 1218 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 GARNL3Q5VVW2 1013 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 RHBDF2Q6PJF5 856 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 PRPF39Q86UA1 669 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 DNAAF5Q86Y56 855 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 NRROSQ86YC3 692 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 ZNF34Q8IZ26 560 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 CLIP4Q8N3C7 705 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 GSDMBQ8TAX9 411 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 SCMH1Q96GD3 660 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 CEP295NLQ96MC4 621 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 GCNAQ96QF7 691 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 PCYT2Q99447 389 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 MTERF1Q99551 399 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 SEZ6LQ9BYH1 1024 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 KLHL4Q9C0H6 718 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 SIL1Q9H173 461 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 MAGIXQ9H6Y5 334 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 CPSF2Q9P2I0 782 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 WNT16Q9UBV4 365 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 DBNLQ9UJU6 430 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 KLHL20Q9Y2M5 609 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 FAM169AQ9Y6X4 670 aa4.63□□□□□ -1.67
SMCHD1-205ENST00000581383 TAF1P21675 1872 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 LNP1A1A4G5 178 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 MAP2K7O14733 419 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 TCERG1O14776 1098 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 RSL1D1O76021 490 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 GAGE7O76087 117 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 DDNO94850 711 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 KDM4BO94953 1096 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 CLDN14O95500 239 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 GAGE12FP0CL80 117 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 GAGE12GP0CL81 117 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 GAGE12IP0CL82 117 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 IGHV4-30-4P0DP06 118 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 FGF3P11487 239 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 ZNF12P17014 697 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 LMAN1P49257 510 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 TMF1P82094 1093 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 PDE1BQ01064 536 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 SPOCK1Q08629 439 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 GAGE1Q13065 139 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 GAGE4Q13068 117 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 OASLQ15646 514 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 TMEM266Q2M3C6 531 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 ZNF628Q5EBL2 1059 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 C18orf63Q68DL7 685 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 NAA16Q6N069 864 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 MCEMP1Q8IX19 187 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 SYT2Q8N9I0 419 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 AVL9Q8NBF6 648 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 ACVR1CQ8NER5 493 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 DUSP19Q8WTR2 217 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 TAAR8Q969N4 342 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 OR1F2PQ96R84 312 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 SEMA3CQ99985 751 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 TMEM39BQ9GZU3 492 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 C1RLQ9NZP8 487 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 MORF4L1Q9UBU8 362 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 FBXL2Q9UKC9 423 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 PADI3Q9ULW8 664 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 B3GALT5Q9Y2C3 310 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 NFS1Q9Y697 457 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 RPS6KL1Q9Y6S9 549 aa4.62□□□□□ -1.67
SMCHD1-205ENST00000581383 GOLGA6L9A6NEM1 432 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 GLOD5A6NK44 160 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 ANKRD28O15084 1053 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 KCNN4O15554 427 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 PLA2G2AP14555 144 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 IL11P20809 199 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 UGT1A1P22309 533 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 HRH2P25021 359 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 FASLGP48023 281 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 PEX5P50542 639 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 LTBQ06643 244 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 CXCL9Q07325 125 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 PRPF4BQ13523 1007 aaKnown RBP4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 IZUMO4Q1ZYL8 232 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 MYLK3Q32MK0 819 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 SETMARQ53H47 684 aaPredicted RBP4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 LCN10Q6JVE6 187 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 KRTAP5-4Q6L8H1 288 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 SLC30A6Q6NXT4 461 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 PAPD4Q6PIY7 484 aaKnown RBP4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 BRAT1Q6PJG6 821 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms