RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.14□□□□□ -0.79
SS18-210ENST00000578700 SLCO3A1Q9UIG8 710 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 INTS6Q9UL03 887 aaKnown RBP10.14□□□□□ -0.79
SS18-210ENST00000578700 ERVW-1Q9UQF0 538 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 TCAF1Q9Y4C2 921 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 PCDHB1Q9Y5F3 818 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 DOCK9Q9BZ29 2069 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 GMNCA6NCL1 334 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 CAPN8A6NHC0 703 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 ERVH48-1M5A8F1 160 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 COPEO14579 308 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 TM9SF1O15321 606 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 SIGLEC6O43699 453 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 TMCC1O94876 653 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 CRTAMO95727 393 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 NDST3O95803 873 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 ASLP04424 464 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 MYF5P13349 255 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 GP5P40197 560 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 HADHAP40939 763 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 RXRGP48443 463 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 CCT5P48643 541 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 CCR5P51681 352 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 ADPRHP54922 357 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 AP1S1P61966 158 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 PPP2CBP62714 309 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 PPP2CAP67775 309 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 SULT2A1Q06520 285 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 NSUN2Q08J23 767 aaKnown RBP eCLIP10.13□□□□□ -0.79
SS18-210ENST00000578700 ILKQ13418 452 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 OLIG2Q13516 323 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 SLC1A5Q15758 541 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 FSCBQ5H9T9 825 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 CPLX4Q7Z7G2 160 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 LMNTD2Q8IXW0 634 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 C4orf33Q8N1A6 199 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 OXR1Q8N573 874 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 AADATQ8N5Z0 425 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 FAM181AQ8N9Y4 354 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 MFSD2AQ8NA29 543 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 ZNF248Q8NDW4 579 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 CALML6Q8TD86 181 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 MRGPRX3Q96LB0 322 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 NUDCD1Q96RS6 583 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 MYOCQ99972 504 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 PAIP2Q9BPZ3 127 aaKnown RBP10.13□□□□□ -0.79
SS18-210ENST00000578700 SEMA4CQ9C0C4 833 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 EPN3Q9H201 632 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 SLC25A13Q9UJS0 675 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 CA5BQ9Y2D0 317 aa10.13□□□□□ -0.79
SS18-210ENST00000578700 EDDM13A0A1B0GTR0 161 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.12□□□□□ -0.79
SS18-210ENST00000578700 LOC285095A0A1B0GVY8 99 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 TRIM38O00635 465 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 NDUFAB1O14561 156 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 FFAR2O15552 330 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 KLK10O43240 276 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 SPAG7O75391 227 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 PIAS1O75925 651 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 ADH1BP00325 375 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 MMP2P08253 660 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 ERVK-10P10266 1014 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 NEFHP12036 1026 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 C5AR1P21730 350 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 ACP1P24666 158 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 MZF1P28698 734 aaPredicted RBP10.12□□□□□ -0.79
SS18-210ENST00000578700 NNMTP40261 264 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 STK19P49842 368 aaPredicted RBP10.12□□□□□ -0.79
SS18-210ENST00000578700 PLK1P53350 603 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 METAP1P53582 386 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 CSE1LP55060 971 aaKnown RBP10.12□□□□□ -0.79
SS18-210ENST00000578700 PCBP4P57723 403 aaKnown RBP10.12□□□□□ -0.79
SS18-210ENST00000578700 TMPRSS3P57727 454 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 GABREP78334 506 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 ECT2LQ008S8 904 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 E2F1Q01094 437 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 RHDQ02161 417 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 KCNC4Q03721 635 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 CYTH1Q15438 398 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 HSP90AA5PQ58FG0 334 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 PITRM1Q5JRX3 1037 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 SIRPB2Q5JXA9 342 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 KIAA0930Q6ICG6 404 aaPredicted RBP10.12□□□□□ -0.79
SS18-210ENST00000578700 DENND5AQ6IQ26 1287 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 CES3Q6UWW8 571 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 PACS1Q6VY07 963 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 STRA8Q7Z7C7 330 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 APCDD1Q8J025 514 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 PGBD5Q8N414 524 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 OTUD6BQ8N6M0 293 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 DCBLD1Q8N8Z6 715 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 OR52K2Q8NGK3 314 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 BCAS4Q8TDM0 211 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 ACMSDQ8TDX5 336 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 KLK6Q92876 244 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 PTPRN2Q92932 1015 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 PEX13Q92968 403 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 TADA1Q96BN2 335 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 CHMP6Q96FZ7 201 aa10.12□□□□□ -0.79
SS18-210ENST00000578700 APOPT1Q96IL0 206 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms