RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 MGAT5BQ3V5L5 792 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 SLC35F1Q5T1Q4 408 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 C6orf52Q5T4I8 152 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 AP1ARQ63HQ0 302 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 FAM171BQ6P995 826 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 RANBP10Q6VN20 620 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 AMIGO2Q86SJ2 522 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 IFNEQ86WN2 208 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 TMEM151AQ8N4L1 468 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 C2CD4AQ8NCU7 369 aaPredicted RBP5.34□□□□□ -1.55
VAPA-203ENST00000577539 ANKRD49Q8WVL7 239 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 FBXO32Q969P5 355 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 RMDN1Q96DB5 314 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 B3GALT6Q96L58 329 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 TRAPPC9Q96Q05 1148 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 PKP2Q99959 881 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 SH3GL3Q99963 347 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 SLC39A3Q9BRY0 314 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 MCMBPQ9BTE3 642 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 SLC25A51Q9H1U9 297 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 CCDC68Q9H2F9 335 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 CDIP1Q9H305 208 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 C6orf203Q9P0P8 240 aaPredicted RBP5.34□□□□□ -1.55
VAPA-203ENST00000577539 FNIP2Q9P278 1114 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 MARCH4Q9P2E8 410 aaPredicted RBP5.34□□□□□ -1.55
VAPA-203ENST00000577539 GIMAP2Q9UG22 337 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 MTF2Q9Y483 593 aaPredicted RBP5.34□□□□□ -1.55
VAPA-203ENST00000577539 TRAF6Q9Y4K3 522 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 NCF1BA6NI72 391 aaPredicted RBP5.34□□□□□ -1.56
VAPA-203ENST00000577539 NCF1CA8MVU1 366 aaPredicted RBP5.34□□□□□ -1.56
VAPA-203ENST00000577539 E7ENX8 843 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 H3BNX3 289 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 NR5A2O00482 541 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 RAMP2O60895 175 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 NBNO60934 754 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 SIX3O95343 332 aaPredicted RBP5.34□□□□□ -1.56
VAPA-203ENST00000577539 SCG5P05408 212 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 VSIG8P0DPA2 414 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 PABPC1P11940 636 aaKnown RBP5.34□□□□□ -1.56
VAPA-203ENST00000577539 NCF1P14598 390 aaPredicted RBP5.34□□□□□ -1.56
VAPA-203ENST00000577539 OR1E1P30953 314 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 DPP6P42658 865 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 NSUN2Q08J23 767 aaKnown RBP eCLIP5.34□□□□□ -1.56
VAPA-203ENST00000577539 FRG1Q14331 258 aaKnown RBP5.34□□□□□ -1.56
VAPA-203ENST00000577539 POLD3Q15054 466 aaPredicted RBP5.34□□□□□ -1.56
VAPA-203ENST00000577539 DHCR24Q15392 516 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 MAPRE2Q15555 327 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 PFKFB4Q16877 469 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 HABP4Q5JVS0 413 aaKnown RBP5.34□□□□□ -1.56
VAPA-203ENST00000577539 PIK3R6Q5UE93 754 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 MFSD14CQ5VZR4 134 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 ZNF280BQ86YH2 543 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 CFAP52Q8N1V2 620 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 ARHGAP18Q8N392 663 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 PTGR2Q8N8N7 351 aaPredicted RBP5.34□□□□□ -1.56
VAPA-203ENST00000577539 CCDC126Q96EE4 140 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 MPP4Q96JB8 637 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 CNDP1Q96KN2 507 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 GPR78Q96P69 363 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 PRPF18Q99633 342 aaKnown RBP5.34□□□□□ -1.56
VAPA-203ENST00000577539 ZYG11BQ9C0D3 744 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 SENP6Q9GZR1 1112 aaPredicted RBP5.34□□□□□ -1.56
VAPA-203ENST00000577539 FAM192AQ9GZU8 254 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 SMOC2Q9H3U7 446 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 RRAGCQ9HB90 399 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 MID1IP1Q9NPA3 183 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 AURKCQ9UQB9 309 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 FAM50BQ9Y247 325 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 ASB3Q9Y575 518 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 TNPO3Q9Y5L0 923 aaKnown RBP5.34□□□□□ -1.56
VAPA-203ENST00000577539 NPFFR2Q9Y5X5 522 aa5.34□□□□□ -1.56
VAPA-203ENST00000577539 A0A0U1RQF3 1178 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 TCAF2A6NFQ2 919 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 TRIM38O00635 465 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 NPHS1O60500 1241 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 GJB3O75712 270 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 SRP72O76094 671 aaKnown RBP5.33□□□□□ -1.56
VAPA-203ENST00000577539 OR6B1O95007 311 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 CLPTM1O96005 669 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 GHRHP01286 108 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 ASGR1P07306 291 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 SLC2A3P11169 496 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 C1QTNF8P60827 252 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 ROR2Q01974 943 aaKnown RBP5.33□□□□□ -1.56
VAPA-203ENST00000577539 HNRNPDQ14103 355 aaKnown RBP5.33□□□□□ -1.56
VAPA-203ENST00000577539 ADGRE1Q14246 886 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 CNPY1Q3B7I2 92 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 CTXN3Q4LDR2 81 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 PIGGQ5H8A4 983 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 TECRLQ5HYJ1 363 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 IL23RQ5VWK5 629 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 ZFP1Q6P2D0 407 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 PAOXQ6QHF9 649 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 SATL1Q86VE3 508 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 DCP1BQ8IZD4 617 aaKnown RBP5.33□□□□□ -1.56
VAPA-203ENST00000577539 NUP93Q8N1F7 819 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 TTC9BQ8N6N2 239 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 ATP6V0D2Q8N8Y2 350 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 KREMEN2Q8NCW0 462 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 LPGAT1Q92604 370 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms