RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 GKAP1Q5VSY0 366 aaPredicted RBP5.1□□□□□ -1.59
NUP88-213ENST00000576862 IRAK1BP1Q5VVH5 260 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 CCDC30Q5VVM6 783 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 PMS2CLQ68D20 193 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 GTF2H2CQ6P1K8 395 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 RAD9BQ6WBX8 426 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 MEX3BQ6ZN04 569 aaKnown RBP5.1□□□□□ -1.59
NUP88-213ENST00000576862 CLEC17AQ6ZS10 378 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 Q6ZTC4 211 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 IKBIPQ70UQ0 350 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 SDCCAG8Q86SQ7 713 aaPredicted RBP5.1□□□□□ -1.59
NUP88-213ENST00000576862 GPR180Q86V85 440 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 MAB21L3Q8N8X9 362 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 HJURPQ8NCD3 748 aaPredicted RBP5.1□□□□□ -1.59
NUP88-213ENST00000576862 HM13Q8TCT9 377 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 SLC38A5Q8WUX1 472 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 ABCA5Q8WWZ7 1642 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 INPP4AQ96PE3 977 aaPredicted RBP5.1□□□□□ -1.59
NUP88-213ENST00000576862 NODALQ96S42 347 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 SDF2L1Q9HCN8 221 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 ARHGAP35Q9NRY4 1499 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 KRT84Q9NSB2 600 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 UBA2Q9UBT2 640 aaPredicted RBP5.1□□□□□ -1.59
NUP88-213ENST00000576862 STK39Q9UEW8 545 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 FBXW11Q9UKB1 542 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 POU2F3Q9UKI9 436 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 DLGAP4Q9Y2H0 992 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 R3HDM2Q9Y2K5 976 aaKnown RBP5.1□□□□□ -1.59
NUP88-213ENST00000576862 A0A1W2PS18 150 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 FRMD3A2A2Y4 597 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 CTAGE9A4FU28 777 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 HS3ST1O14792 307 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 BAIAP3O94812 1187 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 UMODP07911 640 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 CTAGE8P0CG41 777 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 KCNA5P22460 613 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 ACADLP28330 430 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 TM4SF1P30408 202 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 ARL3P36405 182 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 PIK3CAP42336 1068 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 GALCP54803 685 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 MAMLD1Q13495 774 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 EIF4A2Q14240 407 aaKnown RBP5.09□□□□□ -1.59
NUP88-213ENST00000576862 JADE1Q6IE81 842 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 KLHL35Q6PF15 583 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 CTAGE4Q8IX94 777 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 WDTC1Q8N5D0 677 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 IL17RCQ8NAC3 791 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 SKA1Q96BD8 255 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 SETD4Q9NVD3 440 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 HCFC1R1Q9NWW0 138 aa5.09□□□□□ -1.59
NUP88-213ENST00000576862 WDR97A6NE52 1622 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 FHAD1B1AJZ9 1412 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 KANSL1LA0AUZ9 987 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 EIF4E1BA6NMX2 242 aaKnown RBP5.08□□□□□ -1.6
NUP88-213ENST00000576862 C16orf97H3BN30 126 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 H3BQ06 376 aaPredicted RBP5.08□□□□□ -1.6
NUP88-213ENST00000576862 ACADMP11310 421 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 MARK3P27448 753 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 COG7P83436 770 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 ACSM2AQ08AH3 577 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 SREBF2Q12772 1141 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 ASTE1Q2TB18 679 aaPredicted RBP5.08□□□□□ -1.6
NUP88-213ENST00000576862 MYLK3Q32MK0 819 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 SARM1Q6SZW1 724 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 CFAP77Q6ZQR2 320 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 USP43Q70EL4 1123 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 MAP7D3Q8IWC1 876 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 OR8K5Q8NH50 307 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 TRPC4APQ8TEL6 797 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 ELMOD3Q96FG2 381 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 CMTM3Q96MX0 182 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 OR2A14Q96R47 310 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 TCF7L2Q9NQB0 619 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 ZFP57Q9NU63 452 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 ZNF112Q9UJU3 913 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 MTMR6Q9Y217 621 aa5.08□□□□□ -1.6
NUP88-213ENST00000576862 THOC2Q8NI27 1593 aaKnown RBP5.08□□□□□ -1.6
NUP88-213ENST00000576862 GRIN2BQ13224 1484 aa5.07□□□□□ -1.6
NUP88-213ENST00000576862 ZNHIT1O43257 154 aa5.07□□□□□ -1.6
NUP88-213ENST00000576862 LMX1BO60663 402 aa5.07□□□□□ -1.6
NUP88-213ENST00000576862 WDR1O75083 606 aa5.07□□□□□ -1.6
NUP88-213ENST00000576862 PTP4A3O75365 173 aa5.07□□□□□ -1.6
NUP88-213ENST00000576862 FAM106CPP0CH98 169 aa5.07□□□□□ -1.6
NUP88-213ENST00000576862 POLR2CP19387 275 aaPredicted RBP5.07□□□□□ -1.6
NUP88-213ENST00000576862 PPARGP37231 505 aaPredicted RBP5.07□□□□□ -1.6
NUP88-213ENST00000576862 IL15P40933 162 aaPredicted RBP5.07□□□□□ -1.6
NUP88-213ENST00000576862 PITX1P78337 314 aaPredicted RBP5.07□□□□□ -1.6
NUP88-213ENST00000576862 PDE1CQ14123 709 aaPredicted RBP5.07□□□□□ -1.6
NUP88-213ENST00000576862 RBBP5Q15291 538 aaKnown RBP5.07□□□□□ -1.6
NUP88-213ENST00000576862 TMEM35AQ53FP2 167 aa5.07□□□□□ -1.6
NUP88-213ENST00000576862 Q75L30 129 aa5.07□□□□□ -1.6
NUP88-213ENST00000576862 RASGEF1CQ8N431 466 aa5.07□□□□□ -1.6
NUP88-213ENST00000576862 OR13A1Q8NGR1 328 aa5.07□□□□□ -1.6
NUP88-213ENST00000576862 SMC6Q96SB8 1091 aa5.07□□□□□ -1.6
NUP88-213ENST00000576862 SIL1Q9H173 461 aa5.07□□□□□ -1.6
NUP88-213ENST00000576862 MMP28Q9H239 520 aa5.07□□□□□ -1.6
NUP88-213ENST00000576862 EPB41L5Q9HCM4 733 aa5.07□□□□□ -1.6
NUP88-213ENST00000576862 ABCF3Q9NUQ8 709 aa5.07□□□□□ -1.6
NUP88-213ENST00000576862 SEPT11Q9NVA2 429 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms