RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 SKIDA1Q1XH10 827 aa10.31□□□□□ -0.76
TVP23B-208ENST00000575261 CRTC2Q53ET0 693 aaPredicted RBP10.31□□□□□ -0.76
TVP23B-208ENST00000575261 ALS2CLQ60I27 953 aa10.31□□□□□ -0.76
TVP23B-208ENST00000575261 PDPK2PQ6A1A2 396 aa10.31□□□□□ -0.76
TVP23B-208ENST00000575261 TIPARPQ7Z3E1 657 aaKnown RBP10.31□□□□□ -0.76
TVP23B-208ENST00000575261 TRIM48Q8IWZ4 208 aa10.31□□□□□ -0.76
TVP23B-208ENST00000575261 UNC5BQ8IZJ1 945 aa10.31□□□□□ -0.76
TVP23B-208ENST00000575261 ESX1Q8N693 406 aa10.31□□□□□ -0.76
TVP23B-208ENST00000575261 PQLC3Q8N755 202 aa10.31□□□□□ -0.76
TVP23B-208ENST00000575261 LRRN4Q8WUT4 740 aa10.31□□□□□ -0.76
TVP23B-208ENST00000575261 APOBEC4Q8WW27 367 aaKnown RBP10.31□□□□□ -0.76
TVP23B-208ENST00000575261 SPATA16Q9BXB7 569 aa10.31□□□□□ -0.76
TVP23B-208ENST00000575261 ULBP3Q9BZM4 244 aa10.31□□□□□ -0.76
TVP23B-208ENST00000575261 OR2AG1Q9H205 316 aa10.31□□□□□ -0.76
TVP23B-208ENST00000575261 UCK1Q9HA47 277 aa10.31□□□□□ -0.76
TVP23B-208ENST00000575261 PRDM8Q9NQV8 689 aa10.31□□□□□ -0.76
TVP23B-208ENST00000575261 RAD18Q9NS91 495 aa10.31□□□□□ -0.76
TVP23B-208ENST00000575261 KLC4Q9NSK0 619 aa10.31□□□□□ -0.76
TVP23B-208ENST00000575261 CTTNBP2NLQ9P2B4 639 aa10.31□□□□□ -0.76
TVP23B-208ENST00000575261 UVRAGQ9P2Y5 699 aa10.31□□□□□ -0.76
TVP23B-208ENST00000575261 NFKBIL1Q9UBC1 381 aaPredicted RBP10.31□□□□□ -0.76
TVP23B-208ENST00000575261 ADGRG1Q9Y653 693 aa10.31□□□□□ -0.76
TVP23B-208ENST00000575261 DOPEY2Q9Y3R5 2298 aa10.31□□□□□ -0.76
TVP23B-208ENST00000575261 UBXN7O94888 489 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 VIPP01282 170 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 JCHAINP01591 159 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 SLC4A1P02730 911 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 C9P02748 559 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 TCN2P20062 427 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 GFERP55789 205 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 TAS2R40P59535 323 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 FANCCQ00597 558 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 FOXM1Q08050 763 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 SLC10A2Q12908 348 aaPredicted RBP10.3□□□□□ -0.76
TVP23B-208ENST00000575261 ZBTB17Q13105 803 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 DEFB109BQ30KR1 87 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 PLA2G4EQ3MJ16 856 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 COLEC12Q5KU26 742 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 CAVIN1Q6NZI2 390 aaKnown RBP10.3□□□□□ -0.76
TVP23B-208ENST00000575261 CRTC3Q6UUV7 619 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 TMEM26Q6ZUK4 368 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 CPNE8Q86YQ8 564 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 TRAM1L1Q8N609 369 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.3□□□□□ -0.76
TVP23B-208ENST00000575261 CTNNBL1Q8WYA6 563 aaPredicted RBP10.3□□□□□ -0.76
TVP23B-208ENST00000575261 GLYATL1Q969I3 302 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 C9orf72Q96LT7 481 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 PLEKHG4BQ96PX9 1271 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 TIMM29Q9BSF4 260 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 TRIM39Q9HCM9 518 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 ARFGAP3Q9NP61 516 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 POT1Q9NUX5 634 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 CAPN11Q9UMQ6 739 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 LUC7L2Q9Y383 392 aaKnown RBP10.3□□□□□ -0.76
TVP23B-208ENST00000575261 KCTD3Q9Y597 815 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 RPS6KL1Q9Y6S9 549 aa10.3□□□□□ -0.76
TVP23B-208ENST00000575261 PDZK1P1A8MUH7 402 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 ZNF487B1APH4 448 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 CHUKO15111 745 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 KMOO15229 486 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 TOX3O15405 576 aaPredicted RBP10.29□□□□□ -0.76
TVP23B-208ENST00000575261 RASSF9O75901 435 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 GYPCP04921 128 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 H2AFZP0C0S5 128 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 PIRTP0C851 137 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 TYRP1P17643 537 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 AMD1P17707 334 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 XRCC1P18887 633 aaPredicted RBP10.29□□□□□ -0.76
TVP23B-208ENST00000575261 CAPZBP47756 277 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 UBASH3AP57075 661 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 FOXK1P85037 733 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 AP1B1Q10567 949 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 SEPT7Q16181 437 aaKnown RBP10.29□□□□□ -0.76
TVP23B-208ENST00000575261 LACTB2Q53H82 288 aaPredicted RBP10.29□□□□□ -0.76
TVP23B-208ENST00000575261 ZNF648Q5T619 568 aaPredicted RBP10.29□□□□□ -0.76
TVP23B-208ENST00000575261 C16orf46Q6P387 395 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 CYB5D1Q6P9G0 228 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 H2AFVQ71UI9 128 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 ADGRG6Q86SQ4 1221 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 NT5DC3Q86UY8 548 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 LRRTM4Q86VH4 590 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 PLD5Q8N7P1 536 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 CNTD1Q8N815 330 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 GPR26Q8NDV2 337 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 CPLX3Q8WVH0 158 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 EID2BQ96D98 161 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 STAMBPL1Q96FJ0 436 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 ABHD17AQ96GS6 310 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 TGM7Q96PF1 710 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 RNF157Q96PX1 679 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 OR6C1Q96RD1 312 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 TRIB3Q96RU7 358 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 CEP41Q9BYV8 373 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 GPR63Q9BZJ6 419 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 ZNF768Q9H5H4 540 aaKnown RBP10.29□□□□□ -0.76
TVP23B-208ENST00000575261 MAGEE1Q9HCI5 957 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 ZNF71Q9NQZ8 489 aaPredicted RBP10.29□□□□□ -0.76
TVP23B-208ENST00000575261 OGFRQ9NZT2 677 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 NENFQ9UMX5 172 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 SHOC2Q9UQ13 582 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms