RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 SPINT3P49223 89 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 LRP8Q14114 963 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 TFDP2Q14188 446 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 PYCR3Q53H96 274 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 HENMT1Q5T8I9 393 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 LRRC38Q5VT99 294 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 CCDC81Q6ZN84 652 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 BZW1Q7L1Q6 419 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 CLEC14AQ86T13 490 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 NAGSQ8N159 534 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 TFB1MQ8WVM0 346 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 SLC39A7Q92504 469 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 HAUS1Q96CS2 278 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 IMP4Q96G21 291 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 AHCYL2Q96HN2 611 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 COX14Q96I36 57 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 RUNDC3BQ96NL0 473 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 OLFM3Q96PB7 478 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 LYSMD1Q96S90 227 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 RUFY1Q96T51 708 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 NUDT22Q9BRQ3 303 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 GPR63Q9BZJ6 419 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 BRD8Q9H0E9 1235 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 SLC25A51Q9H1U9 297 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 SEMA6CQ9H3T2 930 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 ZFYVE1Q9HBF4 777 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 KCNK4Q9NYG8 393 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 VPS18Q9P253 973 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 PACSIN2Q9UNF0 486 aaPredicted RBP9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 ZNF711Q9Y462 761 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 PRKAB1Q9Y478 270 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 OAS3Q9Y6K5 1087 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 SDK2Q58EX2 2172 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 KALRNO60229 2985 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 CCDC66A2RUB6 948 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 FADS2P1A8MWK0 482 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 F5H423 210 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 ATXN7O15265 892 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 CST8O60676 142 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 SNX2O60749 519 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 PMPCBO75439 489 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 MT-CYBP00156 380 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 ACP5P13686 325 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 GPR3P46089 330 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 NR2C2P49116 596 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 B4GALNT1Q00973 533 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 RHDQ02161 417 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 CDK18Q07002 472 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 VAC14Q08AM6 782 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 CLN3Q13286 438 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 PLA2G4EQ3MJ16 856 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 NKAIN2Q5VXU1 208 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 EMBQ6PCB8 327 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 SPOCD1Q6ZMY3 1216 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 USP53Q70EK8 1073 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 TMPRSS9Q7Z410 1059 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 ZC3H18Q86VM9 953 aaKnown RBP9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 NLRP8Q86W28 1048 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 ZNF761Q86XN6 746 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 SLITRK4Q8IW52 837 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 RAVER1Q8IY67 606 aaKnown RBP9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 CNTD1Q8N815 330 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 RCBTB1Q8NDN9 531 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 SPATA22Q8NHS9 363 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 P3H4Q92791 437 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 TMEM159Q96B96 161 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 SCARF2Q96GP6 870 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 HES6Q96HZ4 224 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 SLC38A3Q99624 504 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 GOLPH3Q9H4A6 298 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 OSGEPL1Q9H4B0 414 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 VIPAS39Q9H9C1 493 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 GLOD4Q9HC38 313 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 RAD18Q9NS91 495 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 ZNF446Q9NWS9 450 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 UBP1Q9NZI7 540 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 KLHL8Q9P2G9 620 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 SAE1Q9UBE0 346 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 KCNK6Q9Y257 313 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 PCDHGA7Q9Y5G6 932 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 ST14Q9Y5Y6 855 aa9.57□□□□□ -0.88
NPLOC4-216ENST00000574344 PRAMEF33A0A0G2JMD5 474 aa9.56□□□□□ -0.88
NPLOC4-216ENST00000574344 RGSL1A5PLK6 1076 aa9.56□□□□□ -0.88
NPLOC4-216ENST00000574344 ERVH48-1M5A8F1 160 aa9.56□□□□□ -0.88
NPLOC4-216ENST00000574344 PPM1DO15297 605 aa9.56□□□□□ -0.88
NPLOC4-216ENST00000574344 GRID2O43424 1007 aa9.56□□□□□ -0.88
NPLOC4-216ENST00000574344 B4GAT1O43505 415 aa9.56□□□□□ -0.88
NPLOC4-216ENST00000574344 DUX1O43812 170 aa9.56□□□□□ -0.88
NPLOC4-216ENST00000574344 PRAMEF10O60809 474 aa9.56□□□□□ -0.88
NPLOC4-216ENST00000574344 DNAJC6O75061 913 aa9.56□□□□□ -0.88
NPLOC4-216ENST00000574344 SLC25A14O95258 325 aaPredicted RBP9.56□□□□□ -0.88
NPLOC4-216ENST00000574344 LIPCP11150 499 aa9.56□□□□□ -0.88
NPLOC4-216ENST00000574344 SLC2A4P14672 509 aa9.56□□□□□ -0.88
NPLOC4-216ENST00000574344 PECAM1P16284 738 aaPredicted RBP9.56□□□□□ -0.88
NPLOC4-216ENST00000574344 NFKB1P19838 968 aa9.56□□□□□ -0.88
NPLOC4-216ENST00000574344 PTPN3P26045 913 aa9.56□□□□□ -0.88
NPLOC4-216ENST00000574344 ETV5P41161 510 aa9.56□□□□□ -0.88
NPLOC4-216ENST00000574344 CDKN2BP42772 138 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms