RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 MUSKO15146 869 aa15.52■□□□□ 0.07
NUP88-207ENST00000573584 RPS17P08708 135 aaKnown RBP15.52■□□□□ 0.07
NUP88-207ENST00000573584 IMPDH2P12268 514 aa15.52■□□□□ 0.07
NUP88-207ENST00000573584 AGTR2P50052 363 aa15.52■□□□□ 0.07
NUP88-207ENST00000573584 HLCSP50747 726 aa15.52■□□□□ 0.07
NUP88-207ENST00000573584 MAP2K5Q13163 448 aa15.52■□□□□ 0.07
NUP88-207ENST00000573584 DDR2Q16832 855 aa15.52■□□□□ 0.07
NUP88-207ENST00000573584 ZNF829Q3KNS6 432 aaPredicted RBP15.52■□□□□ 0.07
NUP88-207ENST00000573584 RAP1GAP2Q684P5 730 aa15.52■□□□□ 0.07
NUP88-207ENST00000573584 XKR5Q6UX68 686 aa15.52■□□□□ 0.07
NUP88-207ENST00000573584 ZNF639Q9UID6 485 aa15.52■□□□□ 0.07
NUP88-207ENST00000573584 SYCE1LA8MT33 242 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 ENPP3O14638 875 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 GPR182O15218 404 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 ESRRBO95718 433 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 TBX18O95935 607 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 ALBP02768 609 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 TFPTP0C1Z6 253 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 UROSP10746 265 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 CD247P20963 164 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 EEF1B2P24534 225 aaKnown RBP15.51■□□□□ 0.07
NUP88-207ENST00000573584 HRH2P25021 359 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 ACVRL1P37023 503 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 TUSC3Q13454 348 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 SERINC3Q13530 473 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 TYSND1Q2T9J0 566 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 ZIK1Q3SY52 487 aaPredicted RBP15.51■□□□□ 0.07
NUP88-207ENST00000573584 SETMARQ53H47 684 aaPredicted RBP15.51■□□□□ 0.07
NUP88-207ENST00000573584 PYCR3Q53H96 274 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 ACBD5Q5T8D3 534 aaPredicted RBP15.51■□□□□ 0.07
NUP88-207ENST00000573584 PROSER1Q86XN7 944 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 TBC1D15Q8TC07 691 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 FUBP1Q96AE4 644 aaKnown RBP15.51■□□□□ 0.07
NUP88-207ENST00000573584 HGH1Q9BTY7 390 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 NUSAP1Q9BXS6 441 aaKnown RBP15.51■□□□□ 0.07
NUP88-207ENST00000573584 ZNF225Q9UK10 706 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 SCML2Q9UQR0 700 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 MED16Q9Y2X0 877 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 ZFC3H1O60293 1989 aaKnown RBP15.51■□□□□ 0.07
NUP88-207ENST00000573584 IGLV3-10A0A075B6K4 115 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 ZSCAN9O15535 394 aaPredicted RBP15.51■□□□□ 0.07
NUP88-207ENST00000573584 EPOP01588 193 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 HTR1EP28566 365 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 ZNF235Q14590 738 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 RBBP7Q16576 425 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 XKR7Q5GH72 579 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 HABP4Q5JVS0 413 aaKnown RBP15.51■□□□□ 0.07
NUP88-207ENST00000573584 UGT3A1Q6NUS8 523 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 MIB1Q86YT6 1006 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 RBM12BQ8IXT5 1001 aaKnown RBP15.51■□□□□ 0.07
NUP88-207ENST00000573584 OR2T11Q8NH01 316 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 BORCS5Q969J3 196 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 ESAMQ96AP7 390 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 SUSD3Q96L08 255 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 MUS81Q96NY9 551 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 BRINP2Q9C0B6 783 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 GALPQ9UBC7 116 aa15.51■□□□□ 0.07
NUP88-207ENST00000573584 NPEPPSL1A6NEC2 478 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 H0YAE9 185 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 BTN3A1O00481 513 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 MGEA5O60502 916 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 NOL3O60936 208 aaKnown RBP15.5■□□□□ 0.07
NUP88-207ENST00000573584 SOAT2O75908 522 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 IL12AP29459 219 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 OR1E1P30953 314 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 MRPL19P49406 292 aaKnown RBP15.5■□□□□ 0.07
NUP88-207ENST00000573584 GPR15P49685 360 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 OR4D2P58180 307 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 NAA20P61599 178 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 EMX2Q04743 252 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 BNIP3Q12983 259 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 MORN1Q5T089 497 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 GLYATQ6IB77 296 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 TMEM214Q6NUQ4 689 aaKnown RBP15.5■□□□□ 0.07
NUP88-207ENST00000573584 FAM117BQ6P1L5 589 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 EFL1Q7Z2Z2 1120 aaKnown RBP15.5■□□□□ 0.07
NUP88-207ENST00000573584 RALGPS2Q86X27 583 aaPredicted RBP15.5■□□□□ 0.07
NUP88-207ENST00000573584 ATP6V0D2Q8N8Y2 350 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 FNDC5Q8NAU1 212 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 PNPT1Q8TCS8 783 aaKnown RBP15.5■□□□□ 0.07
NUP88-207ENST00000573584 NSMCE2Q96MF7 247 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 RPRD1AQ96P16 312 aaPredicted RBP15.5■□□□□ 0.07
NUP88-207ENST00000573584 LRRC3Q9BY71 257 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 ZFYVE28Q9HCC9 887 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 B4GAT1O43505 415 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 MLYCDO95822 493 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 ENO2P09104 434 aaPredicted RBP15.5■□□□□ 0.07
NUP88-207ENST00000573584 ELK4P28324 431 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 POLR2IP36954 125 aaKnown RBP15.5■□□□□ 0.07
NUP88-207ENST00000573584 ERVK-8P63133 956 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 IRF5Q13568 498 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 PDCD4Q53EL6 469 aaKnown RBP15.5■□□□□ 0.07
NUP88-207ENST00000573584 SLC2A7Q6PXP3 512 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 TRIM74Q86UV6 250 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 TRIM73Q86UV7 250 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 LEMD2Q8NC56 503 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 BTN2A3PQ96KV6 586 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 GPR21Q99679 349 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 PTPN18Q99952 460 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 TUBA1CQ9BQE3 449 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms