RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 BUD23O43709 281 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 PYGMP11217 842 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 SLC2A4P14672 509 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 ETV5P41161 510 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 GSDMDP57764 484 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 EIF3EP60228 445 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 MPP3Q13368 585 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 C16orf72Q14CZ0 275 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 SLC1A5Q15758 541 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 PDPK2PQ6A1A2 396 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 ITPRIPL1Q6GPH6 555 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 DARS2Q6PI48 645 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 ZNF574Q6ZN55 896 aaPredicted RBP12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 GLT6D1Q7Z4J2 308 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 SLC9B2Q86UD5 537 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 CDKL3Q8IVW4 592 aaPredicted RBP12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 OR10G6Q8NH81 332 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 ACTL9Q8TC94 416 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 BBC3Q96PG8 261 aaPredicted RBP12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 PLEKHG4BQ96PX9 1271 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 TRABDQ9H4I3 376 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 PRDM8Q9NQV8 689 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 NFKBIL1Q9UBC1 381 aaPredicted RBP12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 AMFRQ9UKV5 643 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 DNAJC16Q9Y2G8 782 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 PCDHGA7Q9Y5G6 932 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 ADGRG1Q9Y653 693 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 ASXL3Q9C0F0 2248 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 RP1P56715 2156 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 URB1O60287 2271 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 PRAMEF33A0A0G2JMD5 474 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 IGHV5-10-1A0A0J9YXX1 117 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 TEX51A0A1B0GUA7 166 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 KMOO15229 486 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 KCNN4O15554 427 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 DUX1O43812 170 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 PRAMEF10O60809 474 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 ANXA9O76027 345 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 STK10O94804 968 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 CDK14O94921 469 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 TJP3O95049 919 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 AGTP01019 485 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 EPOP01588 193 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 RBP3P10745 1247 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 F3P13726 295 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 HLA-DPA1P20036 260 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 CSF2RBP32927 897 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 HMGCLP35914 325 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 SPAM1P38567 509 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 FASLGP48023 281 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 LIMK2P53671 638 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 GEMP55040 296 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 GPLD1P80108 840 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 CLN3Q13286 438 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 GTF2H3Q13889 308 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 SEPT7Q16181 437 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 CLPPQ16740 277 aaPredicted RBP12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 ATP13A5Q4VNC0 1218 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 SNAP47Q5SQN1 464 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 IYDQ6PHW0 289 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 FAM151BQ6UXP7 276 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 CCDC81Q6ZN84 652 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 PEX26Q7Z412 305 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 LRRTM4Q86VH4 590 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 TXLNBQ8N3L3 684 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 USP7Q93009 1102 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 TTC25Q96NG3 672 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 FICDQ9BVA6 458 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 GBA3Q9H227 469 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 HACD3Q9P035 362 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 TMEM9Q9P0T7 183 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 PKP3Q9Y446 797 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 CAPN6Q9Y6Q1 641 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 ACACAQ13085 2346 aa12.54□□□□□ -0.4
NPLOC4-213ENST00000573519 GLYATL1P3A0A0U1RQE8 302 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 A8MU76 341 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 PDZK1P1A8MUH7 402 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 GPR89AB7ZAQ6 455 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 HGSO14964 777 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 NVLO15381 856 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 VEGFDO43915 354 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 GPR89BP0CG08 455 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 CCL4P13236 92 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 ZNF7P17097 686 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 PSMB4P28070 264 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 CSTF2P33240 577 aaKnown RBP eCLIP12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 VAC14Q08AM6 782 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 COL9A2Q14055 689 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 PRPSAP1Q14558 356 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 ANKRD20A2Q5SQ80 823 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 ANKRD20A1Q5TYW2 823 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 TMEM164Q5U3C3 297 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 ANKRD20A3Q5VUR7 823 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 ZDHHC20Q5W0Z9 365 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 TRAPPC5Q8IUR0 188 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 TRIM48Q8IWZ4 208 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 SYCE1Q8N0S2 351 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 TTC30BQ8N4P2 665 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 UBL4BQ8N7F7 174 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms