RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 AKAP3O75969 853 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 B3GAT3O94766 335 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 ZNF202O95125 648 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 NPSP0C0P6 89 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 TMIGD3P0DMS9 266 aaPredicted RBP5.6□□□□□ -1.51
SF3B3-214ENST00000572365 EEFSECP57772 596 aaKnown RBP5.6□□□□□ -1.51
SF3B3-214ENST00000572365 FAM3BP58499 235 aaPredicted RBP5.6□□□□□ -1.51
SF3B3-214ENST00000572365 FCHO2Q0JRZ9 810 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 TRDNQ13061 729 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 AARS2Q5JTZ9 985 aaKnown RBP5.6□□□□□ -1.51
SF3B3-214ENST00000572365 DNTTIP2Q5QJE6 756 aaKnown RBP5.6□□□□□ -1.51
SF3B3-214ENST00000572365 INTS11Q5TA45 600 aaKnown RBP5.6□□□□□ -1.51
SF3B3-214ENST00000572365 C16orf89Q6UX73 402 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 ANO5Q75V66 913 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 CENPQQ7L2Z9 268 aaPredicted RBP5.6□□□□□ -1.51
SF3B3-214ENST00000572365 LPCAT2Q7L5N7 544 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 MIER3Q7Z3K6 550 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 ZNF410Q86VK4 478 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 TMTC1Q8IUR5 882 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 ULK2Q8IYT8 1036 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 NAXEQ8NCW5 288 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 BEND2Q8NDZ0 799 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 STKLD1Q8NE28 680 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 OR52L2PQ8NGH6 319 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 ZNF461Q8TAF7 563 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 SLC2A12Q8TD20 617 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 GLMPQ8WWB7 406 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 PPM1MQ96MI6 270 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 COG8Q96MW5 612 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 TWNKQ96RR1 684 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 EIF2AK1Q9BQI3 630 aaKnown RBP5.6□□□□□ -1.51
SF3B3-214ENST00000572365 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.6□□□□□ -1.51
SF3B3-214ENST00000572365 CINPQ9BW66 212 aaPredicted RBP5.6□□□□□ -1.51
SF3B3-214ENST00000572365 YY1AP1Q9H869 796 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 POLD4Q9HCU8 107 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 UBN1Q9NPG3 1134 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 ASAH2Q9NR71 780 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 TBC1D22BQ9NU19 505 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 MTRRQ9UBK8 725 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 PILRBQ9UKJ0 227 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 CRYL1Q9Y2S2 319 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 NUMA1Q14980 2115 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 POLQO75417 2590 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 MBD3L5A6NJ08 208 aaPredicted RBP5.59□□□□□ -1.51
SF3B3-214ENST00000572365 E7EWF7 191 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 QSOX1O00391 747 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 HOXC11O43248 304 aaPredicted RBP5.59□□□□□ -1.51
SF3B3-214ENST00000572365 C1RP00736 705 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 MBPP02686 304 aaPredicted RBP5.59□□□□□ -1.51
SF3B3-214ENST00000572365 POLBP06746 335 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 ADH4P08319 380 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 CYP3A4P08684 503 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 FAM163BP0C2L3 166 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 EBLN1P0CF75 366 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 MATN1P21941 496 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 CNTFP26441 200 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 CCT8P50990 548 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 CCR5P51681 352 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 RPL15P61313 204 aaKnown RBP5.59□□□□□ -1.51
SF3B3-214ENST00000572365 TLE3Q04726 772 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 CCDC15Q0P6D6 951 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 GRIK3Q13003 919 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 TBX2Q13207 712 aaPredicted RBP5.59□□□□□ -1.51
SF3B3-214ENST00000572365 RUNX3Q13761 415 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 CBFBQ13951 182 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 ZNF169Q14929 603 aaPredicted RBP5.59□□□□□ -1.51
SF3B3-214ENST00000572365 RNASE12Q5GAN4 147 aaKnown RBP5.59□□□□□ -1.51
SF3B3-214ENST00000572365 NOTUMQ6P988 496 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 Q6ZPA2 131 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 SYT13Q7L8C5 426 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 HAUS6Q7Z4H7 955 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 NAXDQ8IW45 347 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 ELMOD1Q8N336 334 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 PDCL2Q8N4E4 241 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 FAM71DQ8N9W8 422 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 LARP4BQ92615 738 aaKnown RBP5.59□□□□□ -1.51
SF3B3-214ENST00000572365 MAELQ96JY0 434 aaKnown RBP5.59□□□□□ -1.51
SF3B3-214ENST00000572365 CEP170P1Q96L14 293 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 SNX18Q96RF0 628 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 P2RY13Q9BPV8 354 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 CDCP1Q9H5V8 836 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 CHODLQ9H9P2 273 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 TRPV4Q9HBA0 871 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 CPNE5Q9HCH3 593 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 WASH6PQ9NQA3 447 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 GAR1Q9NY12 217 aaKnown RBP5.59□□□□□ -1.51
SF3B3-214ENST00000572365 WRAP73Q9P2S5 460 aaPredicted RBP5.59□□□□□ -1.51
SF3B3-214ENST00000572365 SLC13A4Q9UKG4 626 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 DERAQ9Y315 318 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 TSC2P49815 1807 aa5.59□□□□□ -1.51
SF3B3-214ENST00000572365 TDRD6O60522 2096 aaKnown RBP5.59□□□□□ -1.52
SF3B3-214ENST00000572365 SDK2Q58EX2 2172 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 CCDC69A6NI79 296 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 B8ZZF3 427 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 TISP43B9A030 160 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 TRDMT1O14717 391 aaKnown RBP5.58□□□□□ -1.52
SF3B3-214ENST00000572365 SUV39H1O43463 412 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 PRAMEF2O60811 474 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 HEXIM1O94992 359 aaKnown RBP5.58□□□□□ -1.52
SF3B3-214ENST00000572365 VNN2O95498 520 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms