RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 CSF2RBP32927 897 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 GRIA1P42261 906 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 GNPDA1P46926 289 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 BLKP51451 505 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 CTSCP53634 463 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 GEMP55040 296 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 MAZP56270 477 aaKnown RBP8.59□□□□□ -1.03
SMG6-210ENST00000572205 B4GALNT1Q00973 533 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 CFHR1Q03591 330 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 SEMA5AQ13591 1074 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 SPARCL1Q14515 664 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 P3H1Q32P28 736 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 ODF2Q5BJF6 829 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 ITPRIPL1Q6GPH6 555 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 DARS2Q6PI48 645 aaKnown RBP8.59□□□□□ -1.03
SMG6-210ENST00000572205 DOK6Q6PKX4 331 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 EFL1Q7Z2Z2 1120 aaKnown RBP8.59□□□□□ -1.03
SMG6-210ENST00000572205 B3GNT8Q7Z7M8 397 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 TMPRSS12Q86WS5 348 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 DDHD1Q8NEL9 900 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 TRIM58Q8NG06 486 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 OR13C4Q8NGS5 318 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 MDM1Q8TC05 714 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 UBE2Q2Q8WVN8 375 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 CCDC74AQ96AQ1 378 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 OR2M4Q96R27 311 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 SPSB2Q99619 263 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 C19orf43Q9BQ61 176 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 ZSCAN5AQ9BUG6 496 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 CDH19Q9H159 772 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 TRABDQ9H4I3 376 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 BPIFA1Q9NP55 256 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 SMARCAL1Q9NZC9 954 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 TAAR2Q9P1P5 351 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 PRKAB1Q9Y478 270 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 RNF215Q9Y6U7 377 aa8.59□□□□□ -1.03
SMG6-210ENST00000572205 AHCTF1Q8WYP5 2266 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 IGLV3-16A0A075B6K0 115 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 TRBV5-4A0A0C4DH59 114 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 B4DGG1 531 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 D6RAR5 112 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 H7C0S8 307 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 CCL22O00626 93 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 ANXA9O76027 345 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 TNFP01375 233 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 PYGLP06737 847 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 ANXA6P08133 673 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 ZSCAN5DPP0CG00 497 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 PRSS56P0CW18 603 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 ALPPL2P10696 532 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 BRAFP15056 766 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 CXCR5P32302 372 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 TARDBPQ13148 414 aaKnown RBP eCLIP8.58□□□□□ -1.04
SMG6-210ENST00000572205 RTP5Q14D33 572 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 RPS6KA1Q15418 735 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 NR0B2Q15466 257 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 TAF1AQ15573 450 aaPredicted RBP8.58□□□□□ -1.04
SMG6-210ENST00000572205 CHRNA6Q15825 494 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 CYP1B1Q16678 543 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 PARP6Q2NL67 630 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 C14orf28Q4W4Y0 310 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 ZNF569Q5MCW4 686 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.58□□□□□ -1.04
SMG6-210ENST00000572205 SEL1L2Q5TEA6 688 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 ADGRD1Q6QNK2 874 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 RD3Q7Z3Z2 195 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 GLT6D1Q7Z4J2 308 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 SPRED1Q7Z699 444 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 PROSER1Q86XN7 944 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 GKN2Q86XP6 184 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 SLITRK4Q8IW52 837 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 NDUFAF2Q8N183 169 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 SLC35F6Q8N357 371 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 GALNT15Q8N3T1 639 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 SFRP1Q8N474 314 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 ANKK1Q8NFD2 765 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 OR13J1Q8NGT2 312 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 ATL2Q8NHH9 583 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 BLOC1S5Q8TDH9 187 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 COG1Q8WTW3 980 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 NAT14Q8WUY8 206 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 TBL1YQ9BQ87 522 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 CCDC3Q9BQI4 270 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 FRMD8P1Q9BZ68 369 aaPredicted RBP8.58□□□□□ -1.04
SMG6-210ENST00000572205 ASCL3Q9NQ33 180 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 PIH1D1Q9NWS0 290 aaKnown RBP8.58□□□□□ -1.04
SMG6-210ENST00000572205 HACD3Q9P035 362 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 SCHIP1Q9P0W5 487 aaPredicted RBP8.58□□□□□ -1.04
SMG6-210ENST00000572205 SIRPGQ9P1W8 387 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 TBC1D29Q9UFV1 150 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 APPL1Q9UKG1 709 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 TTC7AQ9ULT0 858 aaPredicted RBP8.58□□□□□ -1.04
SMG6-210ENST00000572205 GPR34Q9UPC5 381 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 ENTPD2Q9Y5L3 495 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 CACNA1GO43497 2377 aa8.58□□□□□ -1.04
SMG6-210ENST00000572205 FER1L5A0AVI2 2057 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 GOLGA6CA6NDK9 693 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 GOLGA6BA6NDN3 693 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 MROH6A6NGR9 719 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 PPM1DO15297 605 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms