RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 WDR83Q9BRX9 315 aaKnown RBP6.91□□□□□ -1.3
SMG6-209ENST00000571442 ZSCAN5AQ9BUG6 496 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 BOCQ9BWV1 1114 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 SLC13A1Q9BZW2 595 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 CHRAC1Q9NRG0 131 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 NLE1Q9NVX2 485 aaPredicted RBP6.91□□□□□ -1.3
SMG6-209ENST00000571442 KCTD5Q9NXV2 234 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 NLGN3Q9NZ94 848 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 GULP1Q9UBP9 304 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 FEZ2Q9UHY8 353 aaPredicted RBP6.91□□□□□ -1.3
SMG6-209ENST00000571442 RABGEF1Q9UJ41 708 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 PKP3Q9Y446 797 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 TCAF1Q9Y4C2 921 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 GPSM3Q9Y4H4 160 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 PRSS21Q9Y6M0 314 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 CSNK1G3Q9Y6M4 447 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 CFAP47Q6ZTR5 3102 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 TRBV5-4A0A0C4DH59 114 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 PRAMEF33A0A0G2JMD5 474 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 GOLGA6L10A0A0M3HER8 536 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 A6NCN8 305 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 PRR19A6NJB7 356 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 C2orf81A6NN90 581 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 B4DGG1 531 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 DNALI1O14645 258 aaPredicted RBP6.9□□□□□ -1.3
SMG6-209ENST00000571442 TPP1O14773 563 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 CHUKO15111 745 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 GRID2O43424 1007 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 RAD51CO43502 376 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 TNFSF14O43557 240 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 CRTAMO95727 393 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 GOT2P00505 430 aaKnown RBP6.9□□□□□ -1.3
SMG6-209ENST00000571442 PYGLP06737 847 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 ACP5P13686 325 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 CTSEP14091 401 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 KELP23276 732 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 PMLP29590 882 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 MAGEA3P43357 314 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 TNNT3P45378 269 aaPredicted RBP6.9□□□□□ -1.3
SMG6-209ENST00000571442 MAZP56270 477 aaKnown RBP6.9□□□□□ -1.3
SMG6-209ENST00000571442 ACVR1Q04771 509 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 TMEM115Q12893 351 aaPredicted RBP6.9□□□□□ -1.3
SMG6-209ENST00000571442 NFATC2Q13469 925 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 TRADDQ15628 312 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 MSS51Q4VC12 460 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 HS1BP3Q53T59 392 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 CCDC157Q569K6 752 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 FNBP1LQ5T0N5 605 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 C6orf132Q5T0Z8 1188 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 PDPK2PQ6A1A2 396 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 SLC30A9Q6PML9 568 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 FAM83HQ6ZRV2 1179 aaPredicted RBP6.9□□□□□ -1.3
SMG6-209ENST00000571442 DET1Q7L5Y6 550 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 CHST15Q7LFX5 561 aaPredicted RBP6.9□□□□□ -1.3
SMG6-209ENST00000571442 TAF8Q7Z7C8 310 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 LINC00523Q86TU6 105 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 LDB1Q86U70 411 aaPredicted RBP6.9□□□□□ -1.3
SMG6-209ENST00000571442 PHYKPLQ8IUZ5 450 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 IGDCC3Q8IVU1 814 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 NAGSQ8N159 534 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 LILRA3Q8N6C8 439 aaPredicted RBP6.9□□□□□ -1.3
SMG6-209ENST00000571442 FAM181AQ8N9Y4 354 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 DDHD1Q8NEL9 900 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 SPATA4Q8NEY3 305 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 GPR156Q8NFN8 814 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 DTX3LQ8TDB6 740 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 HDAC10Q969S8 669 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 MFSD3Q96ES6 412 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 FCRL3Q96P31 734 aaPredicted RBP6.9□□□□□ -1.3
SMG6-209ENST00000571442 SERPINB12Q96P63 405 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 SRPK1Q96SB4 655 aaKnown RBP6.9□□□□□ -1.3
SMG6-209ENST00000571442 CDH19Q9H159 772 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 SLC32A1Q9H598 525 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 ASB8Q9H765 288 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 PLAC1Q9HBJ0 212 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 TRIM39Q9HCM9 518 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 RAD18Q9NS91 495 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 TREX1Q9NSU2 369 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 SMOXQ9NWM0 555 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 TRNAU1APQ9NX07 287 aaKnown RBP6.9□□□□□ -1.3
SMG6-209ENST00000571442 IL1RAPL1Q9NZN1 696 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 SCHIP1Q9P0W5 487 aaPredicted RBP6.9□□□□□ -1.3
SMG6-209ENST00000571442 TAAR2Q9P1P5 351 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 VPS18Q9P253 973 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 MARCH4Q9P2E8 410 aaPredicted RBP6.9□□□□□ -1.3
SMG6-209ENST00000571442 FTSJ1Q9UET6 329 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 ZNHIT2Q9UHR6 403 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 KCNK6Q9Y257 313 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 FRYQ5TBA9 3013 aa6.9□□□□□ -1.3
SMG6-209ENST00000571442 ZFYVE26Q68DK2 2539 aa6.9□□□□□ -1.31
SMG6-209ENST00000571442 ZFHX4Q86UP3 3567 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 IGLV3-16A0A075B6K0 115 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 TRBV23OR9-2A0A075B6M9 112 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 HEATR9A2RTY3 570 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 OR2AG2A6NM03 316 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 GOLGA8KD6RF30 607 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 GOLGA8TH3BQL2 631 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 HYAL3O43820 417 aaPredicted RBP6.89□□□□□ -1.31
SMG6-209ENST00000571442 OR1I1O60431 355 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 CDK14O94921 469 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms