RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 MAPKAPK2P49137 400 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 CLCQ05315 142 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 RAD51Q06609 339 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 LRP8Q14114 963 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 MRPL58Q14197 206 aaKnown RBP8.7□□□□□ -1.02
LINC00558-201ENST00000569422 ARHGEF6Q15052 776 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 HECTD3Q5T447 861 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 LARP4Q71RC2 724 aaKnown RBP eCLIP8.7□□□□□ -1.02
LINC00558-201ENST00000569422 CPNE9Q8IYJ1 553 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 EEF1AKMT1Q8WVE0 214 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 PRPF18Q99633 342 aaKnown RBP8.7□□□□□ -1.02
LINC00558-201ENST00000569422 TUBB1Q9H4B7 451 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 SPATS2LQ9NUQ6 558 aaKnown RBP8.7□□□□□ -1.02
LINC00558-201ENST00000569422 CD274Q9NZQ7 290 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 SRRDQ9UH36 339 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 ASB1Q9Y576 335 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 ZNF236Q9UL36 1845 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 ANGPT2O15123 496 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 PRAMEF12O95522 483 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 CHN2P52757 468 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 HERC3Q15034 1050 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 MAPRE2Q15555 327 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 ANKS3Q6ZW76 656 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 HERC6Q8IVU3 1022 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 CDYL2Q8N8U2 506 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 STAG3L4Q8TBR4 150 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 PBXIP1Q96AQ6 731 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 NMD3Q96D46 503 aaKnown RBP8.7□□□□□ -1.02
LINC00558-201ENST00000569422 SLC25A23Q9BV35 468 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 UNC93B1Q9H1C4 597 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 PDFQ9HBH1 243 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 RIMS3Q9UJD0 308 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 VPS28Q9UK41 221 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 TRPM7Q96QT4 1865 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 A0A1B0GTW7 788 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 FAM92AA1XBS5 289 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 GIPC1O14908 333 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 SNX2O60749 519 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 STAMBPO95630 424 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 IGLV3-27P01718 113 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 MT-ND1P03886 318 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 GLULP15104 373 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 DNAJB1P25685 340 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 GPNMBQ14956 572 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 SLC30A9Q6PML9 568 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 CHSY3Q70JA7 882 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 SPPL2CQ8IUH8 684 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 LINGO1Q96FE5 620 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 SH3GL1Q99961 368 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 HGH1Q9BTY7 390 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 MAGEH1Q9H213 219 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 COQ10BQ9H8M1 238 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 IL37Q9NZH6 218 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 FNIP2Q9P278 1114 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 EIF2B4Q9UI10 523 aaKnown RBP8.69□□□□□ -1.02
LINC00558-201ENST00000569422 TRMT6Q9UJA5 497 aaKnown RBP8.69□□□□□ -1.02
LINC00558-201ENST00000569422 SQORQ9Y6N5 450 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 PRRC2BQ5JSZ5 2229 aaKnown RBP8.69□□□□□ -1.02
LINC00558-201ENST00000569422 ZNF840PA6NDX5 716 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 SAC3D1A6NKF1 404 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 ARVCFO00192 962 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 TBL1XO60907 577 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 STC2O76061 302 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 PRLP01236 227 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 MBL2P11226 248 aaPredicted RBP8.69□□□□□ -1.02
LINC00558-201ENST00000569422 PSMC3P17980 439 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 CAPN3P20807 821 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 ADSLP30566 484 aaPredicted RBP8.69□□□□□ -1.02
LINC00558-201ENST00000569422 GSTT1P30711 240 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 PIK3CGP48736 1102 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 UGT3A2Q3SY77 523 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 LIN52Q52LA3 116 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 ANKS6Q68DC2 871 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.69□□□□□ -1.02
LINC00558-201ENST00000569422 CANT1Q8WVQ1 401 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 ASB9Q96DX5 294 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 TEX37Q96LM6 180 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 PSKH2Q96QS6 385 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 SLC22A12Q96S37 553 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 ATOH8Q96SQ7 321 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 GPR63Q9BZJ6 419 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 TRIM4Q9C037 500 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 SYTL2Q9HCH5 934 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 HMX1Q9NP08 348 aaPredicted RBP8.69□□□□□ -1.02
LINC00558-201ENST00000569422 TRPM5Q9NZQ8 1165 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 ASB3Q9Y575 518 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 MYLKQ15746 1914 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 MOXD2PA6NHM9 499 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 ANKRD66B4E2M5 251 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 H7C4K7 107 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 CASQ2O14958 399 aaPredicted RBP8.69□□□□□ -1.02
LINC00558-201ENST00000569422 SLC22A2O15244 555 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 TMCC1O94876 653 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 NCK1P16333 377 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 LPOP22079 712 aaPredicted RBP8.69□□□□□ -1.02
LINC00558-201ENST00000569422 VAMP1P23763 118 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 CDH4P55283 916 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 RING1Q06587 406 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 TRAF2Q12933 501 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 SLC14A2Q15849 920 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms