RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 OR4N2Q8NGD1 307 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 NCSTNQ92542 709 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 ATOH1Q92858 354 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 BAG1Q99933 345 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 KRTAP1-5Q9BYS1 174 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 TXLNGYQ9BZA5 131 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 DCLK3Q9C098 648 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 LHPPQ9H008 270 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 RETREG1Q9H6L5 497 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 CATSPERBQ9H7T0 1116 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 DDX4Q9NQI0 724 aaKnown RBP3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 ATP8A2Q9NTI2 1148 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 PLK2Q9NYY3 685 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 DHDHQ9UQ10 334 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 PIAS3Q9Y6X2 628 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 COL2A1P02458 1487 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 FOCADQ5VW36 1801 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 LAMA3Q16787 3333 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 MYH8P13535 1937 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 C17orf102A2RUQ5 167 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 SAC3D1A6NKF1 404 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 AGAP14A8MT82 685 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 LACTBL1A8MY62 500 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 MS4A18H0YCH9 400 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 H7C0S8 307 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 AP3D1O14617 1153 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 KLK10O43240 276 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 LIASO43766 372 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 PGM3O95394 542 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 F9P00740 461 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 APOA4P06727 396 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 ACAA1P09110 424 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 ACSL1P33121 698 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 RFC1P35251 1148 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 PCYT1AP49585 367 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 CDH12P55289 794 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 IFI35P80217 286 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 ZXDBP98169 803 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 CREB5Q02930 508 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 CDC16Q13042 620 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 WTAPQ15007 396 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 PSMD6Q15008 389 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 BAK1Q16611 211 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 ME3Q16798 604 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 ZNF585BQ52M93 769 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 CAVIN4Q5BKX8 364 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 RILPL1Q5EBL4 403 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 PRAMEF19Q5SWL8 479 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 HECTD3Q5T447 861 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 BEND3Q5T5X7 828 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 ATG9BQ674R7 924 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 FAM109BQ6ICB4 259 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 KIAA1161Q6NSJ0 714 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 FAM47EQ6ZV65 393 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 TEX11Q8IYF3 940 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 CHCHD4Q8N4Q1 142 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 ZNF713Q8N859 430 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 ANKRD44Q8N8A2 993 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 TEX45Q8NA69 505 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 GPT2Q8TD30 523 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 SLC35F5Q8WV83 523 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 THOC3Q96J01 351 aaKnown RBP3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 YME1L1Q96TA2 773 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 NTPCRQ9BSD7 190 aaKnown RBP3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 TMEM204Q9BSN7 226 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 PHF7Q9BWX1 381 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 SIL1Q9H173 461 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 PORCNQ9H237 461 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 STN1Q9H668 368 aaKnown RBP3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 BICC1Q9H694 974 aaKnown RBP3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 BRF2Q9HAW0 419 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 WDR6Q9NNW5 1121 aaKnown RBP3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 SEPT11Q9NVA2 429 aaKnown RBP3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 HIF1ANQ9NWT6 349 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 MYO6Q9UM54 1294 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 AGTPBP1Q9UPW5 1226 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 CAMK2AQ9UQM7 478 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 CLDN16Q9Y5I7 305 aa3.45□□□□□ -1.86
HMGB1P6-201ENST00000569046 VCANP13611 3396 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 FAM90A7PA6NKC0 464 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 C4orf47A7E2U8 309 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 FAM90A22PA8MWA6 464 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 FAM90A12PA8MX19 464 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 FAM90A23PA8MXZ1 464 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 FAM157AC9JC47 383 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 SOX30O94993 753 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 HSPA4LO95757 839 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 ADAP00813 363 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 SERPINC1P01008 464 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 CLEC3BP05452 202 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 HOXC6P09630 235 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 MYZAPP0CAP1 466 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 T-ENOLP0DO92 83 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 TNNT1P13805 278 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 ENO3P13929 434 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 YWHAQP27348 245 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 CALRP27797 417 aaKnown RBP3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 ADORA1P30542 326 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 HOXD3P31249 432 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 CTNNA1P35221 906 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms