RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ERVH48-1M5A8F1 160 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 AURKAO14965 403 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 CHUKO15111 745 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 KMOO15229 486 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 NVLO15381 856 aaKnown RBP4.73□□□□□ -1.65
CLK3-219ENST00000567805 PJA2O43164 708 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 DUX1O43812 170 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 VEGFDO43915 354 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 NUAK1O60285 661 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 PPFIA2O75334 1257 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 ZNF189O75820 626 aaPredicted RBP4.73□□□□□ -1.65
CLK3-219ENST00000567805 TJP3O95049 919 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 EML2O95834 649 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 APOC2P02655 101 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 SLC4A1P02730 911 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 ACP5P13686 325 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 F3P13726 295 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 HGFP14210 728 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 ZNF8P17098 575 aaPredicted RBP4.73□□□□□ -1.65
CLK3-219ENST00000567805 BPIP17213 487 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 NFKB1P19838 968 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 HLA-DPA1P20036 260 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 CTNNA2P26232 953 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 CD1CP29017 333 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 SLC5A2P31639 672 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 PTPN7P35236 360 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 HMGCLP35914 325 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 CETN2P41208 172 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 ATP5OP48047 213 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 CLCNKAP51800 687 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 VAV2P52735 878 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 LIMK2P53671 638 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 NAP1L1P55209 391 aaKnown RBP4.73□□□□□ -1.65
CLK3-219ENST00000567805 WNT3AP56704 352 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 RWDD2BP57060 319 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 CXADRP78310 365 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 HHEXQ03014 270 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 VAC14Q08AM6 782 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 CLN3Q13286 438 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 MPP3Q13368 585 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 TRA2AQ13595 282 aaKnown RBP eCLIP4.73□□□□□ -1.65
CLK3-219ENST00000567805 KIR2DS5Q14953 304 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 NOMO1Q15155 1222 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 SLC1A5Q15758 541 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 AMZ1Q400G9 498 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 SOWAHCQ53LP3 525 aaPredicted RBP4.73□□□□□ -1.65
CLK3-219ENST00000567805 SIRPB2Q5JXA9 342 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.73□□□□□ -1.65
CLK3-219ENST00000567805 FAM182AQ5T1J6 154 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 PHF19Q5T6S3 580 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 LCE2AQ5TA79 106 aaPredicted RBP4.73□□□□□ -1.65
CLK3-219ENST00000567805 CCDC181Q5TID7 509 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 TMEM164Q5U3C3 297 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 ZDHHC20Q5W0Z9 365 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 ALS2CLQ60I27 953 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 ITPRIPL1Q6GPH6 555 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 IYDQ6PHW0 289 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 WDR74Q6RFH5 385 aaPredicted RBP4.73□□□□□ -1.65
CLK3-219ENST00000567805 KDELC1Q6UW63 502 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 RAD9BQ6WBX8 426 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 PID1Q7Z2X4 250 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 TMPRSS9Q7Z410 1059 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 GLT6D1Q7Z4J2 308 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 SLC9B2Q86UD5 537 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 LRRTM4Q86VH4 590 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 JAMLQ86YT9 394 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 ZNF567Q8N184 647 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 TXLNBQ8N3L3 684 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 LSM14AQ8ND56 463 aaKnown RBP4.73□□□□□ -1.65
CLK3-219ENST00000567805 GPR26Q8NDV2 337 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 OR4D9Q8NGE8 314 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 OR10G6Q8NH81 332 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 DTX3LQ8TDB6 740 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 SLC37A2Q8TED4 501 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 SNRNP27Q8WVK2 155 aaKnown RBP4.73□□□□□ -1.65
CLK3-219ENST00000567805 GLYATL1Q969I3 302 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 SH3KBP1Q96B97 665 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 HAUS1Q96CS2 278 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 AHCYL2Q96HN2 611 aaKnown RBP4.73□□□□□ -1.65
CLK3-219ENST00000567805 MRGPRX2Q96LB1 330 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 BBC3Q96PG8 261 aaPredicted RBP4.73□□□□□ -1.65
CLK3-219ENST00000567805 PPP1R2P1Q96PQ5 205 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 SLC38A3Q99624 504 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 BAG1Q99933 345 aaPredicted RBP4.73□□□□□ -1.65
CLK3-219ENST00000567805 NUDT22Q9BRQ3 303 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 TIMM29Q9BSF4 260 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 HEMGNQ9BXL5 484 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 FSD1LQ9BXM9 530 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.73□□□□□ -1.65
CLK3-219ENST00000567805 OSBPL8Q9BZF1 889 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 OR2AG1Q9H205 316 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 GBA3Q9H227 469 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 SEMA6CQ9H3T2 930 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 RDH14Q9HBH5 336 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 CPNE5Q9HCH3 593 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 TRIM39Q9HCM9 518 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 SARS2Q9NP81 518 aaKnown RBP4.73□□□□□ -1.65
CLK3-219ENST00000567805 KCNK4Q9NYG8 393 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 IMPACTQ9P2X3 320 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 ATXN10Q9UBB4 475 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms