RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 SLC22A25Q6T423 547 aa8.37□□□□□ -1.07
NIFKP4-201ENST00000567275 TBC1D1Q86TI0 1168 aaPredicted RBP8.37□□□□□ -1.07
NIFKP4-201ENST00000567275 CLIP4Q8N3C7 705 aa8.37□□□□□ -1.07
NIFKP4-201ENST00000567275 CLEC18CQ8NCF0 446 aa8.37□□□□□ -1.07
NIFKP4-201ENST00000567275 SLC25A33Q9BSK2 321 aa8.37□□□□□ -1.07
NIFKP4-201ENST00000567275 C11orf49Q9H6J7 331 aa8.37□□□□□ -1.07
NIFKP4-201ENST00000567275 TMEM160Q9NX00 188 aa8.37□□□□□ -1.07
NIFKP4-201ENST00000567275 RAI14Q9P0K7 980 aa8.37□□□□□ -1.07
NIFKP4-201ENST00000567275 NDRG3Q9UGV2 375 aa8.37□□□□□ -1.07
NIFKP4-201ENST00000567275 LRP12Q9Y561 859 aa8.37□□□□□ -1.07
NIFKP4-201ENST00000567275 LAMA3Q16787 3333 aa8.37□□□□□ -1.07
NIFKP4-201ENST00000567275 SZT2Q5T011 3432 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 GOLGA6L10A0A0M3HER8 536 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 PRSS47A8MTI9 375 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 B4E171 279 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 ACOT8O14734 319 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 FCGR1AP12314 374 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 ATP1A3P13637 1013 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 PTPN2P17706 415 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 CAPN3P20807 821 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 RPL3P39023 403 aaKnown RBP8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 RGS2P41220 211 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 TSPAN7P41732 249 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 CCNA1P78396 465 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 CYP4A11Q02928 519 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 KEAP1Q14145 624 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 NFATC4Q14934 902 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 EFHC1Q5JVL4 640 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 NAA16Q6N069 864 aaPredicted RBP8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 MZT2BQ6NZ67 158 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 FAM160B2Q86V87 743 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 TDHQ8IZJ6 230 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 TRIB2Q92519 343 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 USP6NLQ92738 828 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 ELP4Q96EB1 424 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 C12orf42Q96LP6 360 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 INTS2Q9H0H0 1204 aaKnown RBP8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 JMJD4Q9H9V9 463 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 RABGAP1Q9Y3P9 1069 aa8.36□□□□□ -1.07
NIFKP4-201ENST00000567275 FLT1P17948 1338 aa8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 LINC01553A4QN01 128 aa8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 CBY3A6NI87 242 aa8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 BAIAP3O94812 1187 aa8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 FGF3P11487 239 aaPredicted RBP8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 PCNAP12004 261 aa8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 ITGB8P26012 769 aa8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 MXI1P50539 228 aa8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 FAM109BQ6ICB4 259 aaPredicted RBP8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 CAPRIN2Q6IMN6 1127 aaKnown RBP8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 CREB3L2Q70SY1 520 aa8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 TBC1D26Q86UD7 250 aa8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 SFTPA2Q8IWL1 248 aa8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 CCDC105Q8IYK2 499 aa8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 TMED6Q8WW62 240 aa8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 CTAGE1Q96RT6 745 aa8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 C6orf106Q9H6K1 298 aaPredicted RBP8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 AGO1Q9UL18 857 aaKnown RBP8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 DOCK3Q8IZD9 2030 aa8.35□□□□□ -1.07
NIFKP4-201ENST00000567275 CCDC196A0A1B0GTZ2 297 aa8.34□□□□□ -1.07
NIFKP4-201ENST00000567275 DYTNA2CJ06 578 aa8.34□□□□□ -1.07
NIFKP4-201ENST00000567275 RYKP34925 604 aa8.34□□□□□ -1.07
NIFKP4-201ENST00000567275 CDH15P55291 814 aa8.34□□□□□ -1.07
NIFKP4-201ENST00000567275 ZNF667Q5HYK9 610 aa8.34□□□□□ -1.07
NIFKP4-201ENST00000567275 TATDN1Q6P1N9 297 aa8.34□□□□□ -1.07
NIFKP4-201ENST00000567275 GPR142Q7Z601 462 aa8.34□□□□□ -1.07
NIFKP4-201ENST00000567275 HVCN1Q96D96 273 aa8.34□□□□□ -1.07
NIFKP4-201ENST00000567275 RRP36Q96EU6 259 aaKnown RBP8.34□□□□□ -1.07
NIFKP4-201ENST00000567275 ZC3HAV1LQ96H79 300 aaKnown RBP8.34□□□□□ -1.07
NIFKP4-201ENST00000567275 DNAJC18Q9H819 358 aa8.34□□□□□ -1.07
NIFKP4-201ENST00000567275 AATFQ9NY61 560 aaKnown RBP eCLIP8.34□□□□□ -1.07
NIFKP4-201ENST00000567275 OR6C3Q9NZP0 311 aa8.34□□□□□ -1.07
NIFKP4-201ENST00000567275 PROCRQ9UNN8 238 aa8.34□□□□□ -1.07
NIFKP4-201ENST00000567275 PFASO15067 1338 aa8.33□□□□□ -1.08
NIFKP4-201ENST00000567275 MAST2Q6P0Q8 1798 aa8.33□□□□□ -1.08
NIFKP4-201ENST00000567275 CUL9Q8IWT3 2517 aa8.33□□□□□ -1.08
NIFKP4-201ENST00000567275 SLC15A5A6NIM6 579 aa8.33□□□□□ -1.08
NIFKP4-201ENST00000567275 TEX22C9J3V5 150 aa8.33□□□□□ -1.08
NIFKP4-201ENST00000567275 CCER2I3L3R5 266 aa8.33□□□□□ -1.08
NIFKP4-201ENST00000567275 SRD5A1P18405 259 aa8.33□□□□□ -1.08
NIFKP4-201ENST00000567275 CYP2B6P20813 491 aa8.33□□□□□ -1.08
NIFKP4-201ENST00000567275 NR1H2P55055 460 aa8.33□□□□□ -1.08
NIFKP4-201ENST00000567275 SEC61A1P61619 476 aaKnown RBP8.33□□□□□ -1.08
NIFKP4-201ENST00000567275 EFNB1P98172 346 aa8.33□□□□□ -1.08
NIFKP4-201ENST00000567275 SERTAD4-AS1Q5TG53 156 aa8.33□□□□□ -1.08
NIFKP4-201ENST00000567275 MFSD14CQ5VZR4 134 aa8.33□□□□□ -1.08
NIFKP4-201ENST00000567275 TADA2BQ86TJ2 420 aa8.33□□□□□ -1.08
NIFKP4-201ENST00000567275 DEFB123Q8N688 67 aa8.33□□□□□ -1.08
NIFKP4-201ENST00000567275 TTYH1Q9H313 450 aaPredicted RBP8.33□□□□□ -1.08
NIFKP4-201ENST00000567275 WDR26Q9H7D7 661 aa8.33□□□□□ -1.08
NIFKP4-201ENST00000567275 BEX4Q9NWD9 120 aaPredicted RBP8.33□□□□□ -1.08
NIFKP4-201ENST00000567275 IRAK4Q9NWZ3 460 aa8.33□□□□□ -1.08
NIFKP4-201ENST00000567275 ATAD5Q96QE3 1844 aa8.32□□□□□ -1.08
NIFKP4-201ENST00000567275 COL6A3P12111 3177 aa8.32□□□□□ -1.08
NIFKP4-201ENST00000567275 TIMM23O14925 209 aa8.32□□□□□ -1.08
NIFKP4-201ENST00000567275 RGS11O94810 467 aa8.32□□□□□ -1.08
NIFKP4-201ENST00000567275 TBX18O95935 607 aa8.32□□□□□ -1.08
NIFKP4-201ENST00000567275 ART1P52961 327 aa8.32□□□□□ -1.08
NIFKP4-201ENST00000567275 IRX6P78412 446 aaPredicted RBP8.32□□□□□ -1.08
NIFKP4-201ENST00000567275 TRAF3Q13114 568 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms