RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 SLC23A3Q6PIS1 610 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 UNC5AQ6ZN44 842 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 PARGQ86W56 976 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 GSPT2Q8IYD1 628 aaKnown RBP11.37□□□□□ -0.59
KARS-207ENST00000566560 NXPE1Q8N323 547 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 GPR161Q8N6U8 529 aaKnown RBP11.37□□□□□ -0.59
KARS-207ENST00000566560 DDHD1Q8NEL9 900 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 OR4L1Q8NH43 312 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 GDAP1Q8TB36 358 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 ZNF398Q8TD17 642 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 PYROXD1Q8WU10 500 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 BTN2A2Q8WVV5 523 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 TCEAL3Q969E4 200 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 PDXPQ96GD0 296 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 COX14Q96I36 57 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 WDR92Q96MX6 357 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 FCRL3Q96P31 734 aaPredicted RBP11.37□□□□□ -0.59
KARS-207ENST00000566560 NUSAP1Q9BXS6 441 aaKnown RBP11.37□□□□□ -0.59
KARS-207ENST00000566560 ZCCHC2Q9C0B9 1178 aaKnown RBP11.37□□□□□ -0.59
KARS-207ENST00000566560 FAM96AQ9H5X1 160 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 UGT1A7Q9HAW7 530 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 UGT1A10Q9HAW8 530 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 UGT1A8Q9HAW9 530 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 CAPN10Q9HC96 672 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 FSCN3Q9NQT6 498 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 CATSPERZQ9NTU4 200 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 IL1RAPL1Q9NZN1 696 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 KLQ9UEF7 1012 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 ANKRD6Q9Y2G4 727 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 SPTY2D1-AS1A0A0U1RR47 76 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 GOLGA8KD6RF30 607 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 GOLGA8TH3BQL2 631 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 KHNYNO15037 678 aaKnown RBP11.36□□□□□ -0.59
KARS-207ENST00000566560 MTX2O75431 263 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 ASMTLO95671 621 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 HOXC4P09017 264 aaPredicted RBP11.36□□□□□ -0.59
KARS-207ENST00000566560 PRSS56P0CW18 603 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 CA5AP35218 305 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 CTSKP43235 329 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 SPEM2Q0P670 501 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 CBLBQ13191 982 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 FZD2Q14332 565 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 GPR33Q49SQ1 333 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 FASTKD1Q53R41 847 aaKnown RBP11.36□□□□□ -0.59
KARS-207ENST00000566560 LDLRAP1Q5SW96 308 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 STEAP4Q687X5 459 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 ENPP7Q6UWV6 458 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 CAPN12Q6ZSI9 719 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 TAS2R42Q7RTR8 314 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 KCNMB4Q86W47 210 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 SPATS2Q86XZ4 545 aaKnown RBP11.36□□□□□ -0.59
KARS-207ENST00000566560 DCP2Q8IU60 420 aaKnown RBP11.36□□□□□ -0.59
KARS-207ENST00000566560 OR56A4Q8NGH8 313 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 GSDMBQ8TAX9 411 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 CERS2Q96G23 380 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 SGSM3Q96HU1 749 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 C9orf72Q96LT7 481 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 FAM167BQ9BTA0 163 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 TSPYL1Q9H0U9 437 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 FGF22Q9HCT0 170 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 ARFGAP3Q9NP61 516 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 C20orf96Q9NUD7 363 aaPredicted RBP11.36□□□□□ -0.59
KARS-207ENST00000566560 TMPRSS11EQ9UL52 423 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 CNOT6Q9ULM6 557 aaKnown RBP11.36□□□□□ -0.59
KARS-207ENST00000566560 SLC6A14Q9UN76 642 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 SNX11Q9Y5W9 270 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 OAS3Q9Y6K5 1087 aaKnown RBP11.36□□□□□ -0.59
KARS-207ENST00000566560 USP34Q70CQ2 3546 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 TDRD6O60522 2096 aaKnown RBP11.36□□□□□ -0.59
KARS-207ENST00000566560 PIKFYVEQ9Y2I7 2098 aa11.36□□□□□ -0.59
KARS-207ENST00000566560 FAM186AA6NE01 2351 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 TRBV5-4A0A0C4DH59 114 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 PRSS38A1L453 326 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 TMEM202A6NGA9 273 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 AGAP14A8MT82 685 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 LRP3O75074 770 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 CER1O95813 267 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 SYPP08247 313 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 OGNP20774 298 aaKnown RBP11.35□□□□□ -0.59
KARS-207ENST00000566560 ACRV1P26436 265 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 MAGEA4P43358 317 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 ARCN1P48444 511 aaKnown RBP11.35□□□□□ -0.59
KARS-207ENST00000566560 CDKN1CP49918 316 aaPredicted RBP11.35□□□□□ -0.59
KARS-207ENST00000566560 BNC1Q01954 994 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 THOC5Q13769 683 aaKnown RBP11.35□□□□□ -0.59
KARS-207ENST00000566560 GTF2H3Q13889 308 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 SEMA3AQ14563 771 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 DBN1Q16643 649 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 ERCC6LQ2NKX8 1250 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 ALG11Q2TAA5 492 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 KHDC1Q4VXA5 237 aaKnown RBP11.35□□□□□ -0.59
KARS-207ENST00000566560 ZNF648Q5T619 568 aaPredicted RBP11.35□□□□□ -0.59
KARS-207ENST00000566560 ZNF470Q6ECI4 717 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 MRNIPQ6NTE8 343 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 IL27RAQ6UWB1 636 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 SERPINA9Q86WD7 417 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 PIANPQ8IYJ0 282 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 OXR1Q8N573 874 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 TTC1Q99614 292 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 COPS8Q99627 209 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms