RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ITIH3Q06033 890 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 ITGADQ13349 1161 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 NAE1Q13564 534 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 RAPSNQ13702 412 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 GALNT3Q14435 633 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 CEBPEQ15744 281 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 UGP2Q16851 508 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 ERCC6LQ2NKX8 1250 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 CCDC40Q4G0X9 1142 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 AARDQ4LEZ3 155 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 KLHL26Q53HC5 615 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 LBHQ53QV2 105 aaPredicted RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 TEX35Q5T0J7 233 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 ZNF618Q5T7W0 954 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 FBXO42Q6P3S6 717 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 RANBP10Q6VN20 620 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 LRRC55Q6ZSA7 311 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 RBM43Q6ZSC3 357 aaKnown RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 Q6ZWC4 215 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 HIST3H2AQ7L7L0 130 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 TRAPPC11Q7Z392 1133 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 ARMC9Q7Z3E5 817 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 CACNA2D4Q7Z3S7 1137 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 PIGWQ7Z7B1 504 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 TLK2Q86UE8 772 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 WDR5BQ86VZ2 330 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 CCDC25Q86WR0 208 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 TMEM173Q86WV6 379 aaPredicted RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 SLC35F3Q8IY50 421 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 TIGD4Q8IY51 512 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 GSPT2Q8IYD1 628 aaKnown RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 TMEM132CQ8N3T6 1108 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 ZBTB2Q8N680 514 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 C12orf76Q8N812 135 aaPredicted RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 GJC3Q8NFK1 279 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 NCOA7Q8NI08 942 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 RNASE8Q8TDE3 154 aaKnown RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 FAR1Q8WVX9 515 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 BCL2L2Q92843 193 aaPredicted RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 IGSF8Q969P0 613 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 AP2M1Q96CW1 435 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 MBD6Q96DN6 1003 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 EDC3Q96F86 508 aaKnown RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 STAMBPL1Q96FJ0 436 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 OTUB1Q96FW1 271 aaPredicted RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 SAMD8Q96LT4 415 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 KLHL5Q96PQ7 755 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 TEFMQ96QE5 360 aaKnown RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 SNX18Q96RF0 628 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 ZNF347Q96SE7 839 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 KCNK16Q96T55 309 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 MMS19Q96T76 1030 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 SEPT5Q99719 369 aaPredicted RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 OLFM1Q99784 485 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 ERP44Q9BS26 406 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 RNF26Q9BY78 433 aaPredicted RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 FRMD8Q9BZ67 464 aaPredicted RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 ZNF350Q9GZX5 532 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 KCNK15Q9H427 330 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 COQ10BQ9H8M1 238 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 RNPEPL1Q9HAU8 725 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 RAB9BQ9NP90 201 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 TMEM161AQ9NX61 479 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 GRHL1Q9NZI5 618 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 HMG20BQ9P0W2 317 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 VPS18Q9P253 973 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 RNF150Q9ULK6 438 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 NUDCQ9Y266 331 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 DTX4Q9Y2E6 619 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 WBP11Q9Y2W2 641 aaKnown RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 CLDN16Q9Y5I7 305 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 CLIC4Q9Y696 253 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 CEPT1Q9Y6K0 416 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 KIF21AQ7Z4S6 1674 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 FAM205AQ6ZU69 1335 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 WDR33Q9C0J8 1336 aaKnown RBP3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 A0A1W2PPM1 405 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 CPED1A4D0V7 1026 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 PMS2P1A4D2B8 440 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 TMEM247A6NEH6 219 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 ZSCAN5CA6NGD5 496 aaPredicted RBP3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 MROH6A6NGR9 719 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 ARHGAP42A6NI28 874 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 TMEM110-MUSTN1A8MSY1 372 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 KLRF2D3W0D1 207 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 H0YC42 278 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 CTDSPLO15194 276 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 MSI1O43347 362 aaKnown RBP3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 MED24O75448 989 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 SCGB2A1O75556 95 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 JRKO75564 520 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 TJP3O95049 919 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 PRAMEF12O95522 483 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 ACSL3O95573 720 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 SLC16A8O95907 504 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 AK1P00568 194 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 OPN1MWP04001 364 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 LINGO3P0C6S8 592 aa3.31□□□□□ -1.88
HERPUD1-211ENST00000566550 OPN1MW2P0DN77 364 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms