RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 GOLGA8KD6RF30 607 aa10.62□□□□□ -0.71
UBFD1-205ENST00000566136 WEE2P0C1S8 567 aa10.62□□□□□ -0.71
UBFD1-205ENST00000566136 TUBG1P23258 451 aa10.62□□□□□ -0.71
UBFD1-205ENST00000566136 GNL1P36915 607 aaPredicted RBP10.62□□□□□ -0.71
UBFD1-205ENST00000566136 SLC11A2P49281 568 aa10.62□□□□□ -0.71
UBFD1-205ENST00000566136 CCDC142Q17RM4 750 aa10.62□□□□□ -0.71
UBFD1-205ENST00000566136 KLC3Q6P597 504 aa10.62□□□□□ -0.71
UBFD1-205ENST00000566136 PAPD4Q6PIY7 484 aaKnown RBP10.62□□□□□ -0.71
UBFD1-205ENST00000566136 FAM213AQ9BRX8 229 aa10.62□□□□□ -0.71
UBFD1-205ENST00000566136 RC3H2Q9HBD1 1191 aaKnown RBP10.62□□□□□ -0.71
UBFD1-205ENST00000566136 TUBG2Q9NRH3 451 aa10.62□□□□□ -0.71
UBFD1-205ENST00000566136 AP5S1Q9NUS5 200 aa10.62□□□□□ -0.71
UBFD1-205ENST00000566136 WSB2Q9NYS7 404 aaPredicted RBP10.62□□□□□ -0.71
UBFD1-205ENST00000566136 KLHL9Q9P2J3 617 aa10.62□□□□□ -0.71
UBFD1-205ENST00000566136 ALG6Q9Y672 507 aa10.62□□□□□ -0.71
UBFD1-205ENST00000566136 SMAD6O43541 496 aaKnown RBP10.61□□□□□ -0.71
UBFD1-205ENST00000566136 GABBR2O75899 941 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 PRLP01236 227 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 FAM58BPP0C7Q3 252 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 TROVE2P10155 538 aaKnown RBP eCLIP10.61□□□□□ -0.71
UBFD1-205ENST00000566136 ZFXP17010 805 aaPredicted RBP10.61□□□□□ -0.71
UBFD1-205ENST00000566136 ZNF3P17036 446 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 PCSK1P29120 753 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 BMXP51813 675 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 FAM3BP58499 235 aaPredicted RBP10.61□□□□□ -0.71
UBFD1-205ENST00000566136 UFM1P61960 85 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 SP2Q02086 613 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 SCN1BQ07699 218 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 MESDQ14696 234 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 TESK1Q15569 626 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 KRT39Q6A163 491 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 FCRL6Q6DN72 434 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 ZPBP2Q6X784 338 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 TRIM67Q6ZTA4 783 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 LYSMD3Q7Z3D4 306 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 FAM71AQ8IYT1 594 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 IQCKQ8N0W5 287 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 ATAD1Q8NBU5 361 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 SNIP1Q8TAD8 396 aaKnown RBP10.61□□□□□ -0.71
UBFD1-205ENST00000566136 DDI1Q8WTU0 396 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 KIFAP3Q92845 792 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 PEX13Q92968 403 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 LRRC37BQ96QE4 947 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 RAB3IPQ96QF0 476 aaPredicted RBP10.61□□□□□ -0.71
UBFD1-205ENST00000566136 POLR3FQ9H1D9 316 aaPredicted RBP10.61□□□□□ -0.71
UBFD1-205ENST00000566136 USP29Q9HBJ7 922 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 GIMAP4Q9NUV9 329 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 DNAJC11Q9NVH1 559 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 RBPJLQ9UBG7 517 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 SLC9A2Q9UBY0 812 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 ANAPC2Q9UJX6 822 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 ARID2Q68CP9 1835 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 MFSD2BA6NFX1 497 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 CCDC188H7C350 402 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 L7N2F9 121 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 LIPFP07098 398 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 AZGP1P25311 298 aaKnown RBP10.61□□□□□ -0.71
UBFD1-205ENST00000566136 NTSR1P30989 418 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 WNT5AP41221 380 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 GPC5P78333 572 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 ARF5P84085 180 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 CYP24A1Q07973 514 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 LSAMPQ13449 338 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 UBAP2LQ14157 1087 aaKnown RBP10.61□□□□□ -0.71
UBFD1-205ENST00000566136 RTP2Q5QGT7 225 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 OR6B2Q6IFH4 312 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 MIS18BP1Q6P0N0 1132 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 MTSS1LQ765P7 747 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 SPATA19Q7Z5L4 167 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 RASGRP3Q8IV61 690 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 DDIASQ8IXT1 998 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 SRRM1Q8IYB3 904 aaKnown RBP10.61□□□□□ -0.71
UBFD1-205ENST00000566136 CAMKVQ8NCB2 501 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 TMEM174Q8WUU8 243 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 TMEM143Q96AN5 459 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 LPIN3Q9BQK8 851 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 DPH1Q9BZG8 443 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 MARCH2Q9P0N8 246 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 ANGPTL2Q9UKU9 493 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 KIAA1257Q9ULG3 409 aa10.61□□□□□ -0.71
UBFD1-205ENST00000566136 MYH9P35579 1960 aaKnown RBP10.6□□□□□ -0.71
UBFD1-205ENST00000566136 SPINT1O43278 529 aa10.6□□□□□ -0.71
UBFD1-205ENST00000566136 UNC5CO95185 931 aa10.6□□□□□ -0.71
UBFD1-205ENST00000566136 MT-ATP6P00846 226 aa10.6□□□□□ -0.71
UBFD1-205ENST00000566136 CST3P01034 146 aaPredicted RBP10.6□□□□□ -0.71
UBFD1-205ENST00000566136 PROCP04070 461 aa10.6□□□□□ -0.71
UBFD1-205ENST00000566136 KRT5P13647 590 aa10.6□□□□□ -0.71
UBFD1-205ENST00000566136 CSF2RBP32927 897 aa10.6□□□□□ -0.71
UBFD1-205ENST00000566136 MFAP3P55082 362 aa10.6□□□□□ -0.71
UBFD1-205ENST00000566136 CNTN2Q02246 1040 aa10.6□□□□□ -0.71
UBFD1-205ENST00000566136 DDX39BQ13838 428 aaKnown RBP10.6□□□□□ -0.71
UBFD1-205ENST00000566136 NTRK2Q16620 822 aa10.6□□□□□ -0.71
UBFD1-205ENST00000566136 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.6□□□□□ -0.71
UBFD1-205ENST00000566136 AAGABQ6PD74 315 aa10.6□□□□□ -0.71
UBFD1-205ENST00000566136 CEP128Q6ZU80 1094 aa10.6□□□□□ -0.71
UBFD1-205ENST00000566136 SV2AQ7L0J3 742 aa10.6□□□□□ -0.71
UBFD1-205ENST00000566136 TAF8Q7Z7C8 310 aa10.6□□□□□ -0.71
UBFD1-205ENST00000566136 P3H2Q8IVL5 708 aa10.6□□□□□ -0.71
UBFD1-205ENST00000566136 ZCCHC7Q8N3Z6 543 aaKnown RBP10.6□□□□□ -0.71
UBFD1-205ENST00000566136 MREGQ8N565 214 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms