RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 KLK10O43240 276 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 AGTP01019 485 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 JMJD7P0C870 316 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 PNLIPP16233 465 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 ITIH1P19827 911 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 MPSTP25325 297 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 PSMB4P28070 264 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 UGT1A5P35504 534 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 MAPK9P45984 424 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 MAPK10P53779 464 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 MPP3Q13368 585 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 PEX6Q13608 980 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 PTPRCAPQ14761 206 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 INSCQ1MX18 579 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 ITPRIPL1Q6GPH6 555 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 GLT6D1Q7Z4J2 308 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 PHYKPLQ8IUZ5 450 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 SPACA3Q8IXA5 215 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 RAVER1Q8IY67 606 aaKnown RBP13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 CCDC110Q8TBZ0 833 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 KCNE4Q8WWG9 221 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 GLYATL1Q969I3 302 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 LIN37Q96GY3 246 aaPredicted RBP13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 PRR11Q96HE9 360 aaPredicted RBP13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 FERMT1Q9BQL6 677 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 ZSCAN5AQ9BUG6 496 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 GBA3Q9H227 469 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 RAD18Q9NS91 495 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 KLC4Q9NSK0 619 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 TRMT1Q9NXH9 659 aaKnown RBP13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 KCNK4Q9NYG8 393 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 TRHDEQ9UKU6 1024 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 DNAJC16Q9Y2G8 782 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 LOXL2Q9Y4K0 774 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 TCRBV7S2A1N4TA0A589 114 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 GPR39O43194 453 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 NUAK1O60285 661 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 STK10O94804 968 aaKnown RBP13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 GEMP55040 296 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 DCDC1P59894 354 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 ERVPABLB-1P60509 514 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 CXADRP78310 365 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 NFATC2Q13469 925 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 LRP8Q14114 963 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 SLC1A5Q15758 541 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 SEPT7Q16181 437 aaKnown RBP13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 ATP13A5Q4VNC0 1218 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 ANKRD20A2Q5SQ80 823 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 SEL1L2Q5TEA6 688 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 ANKRD20A1Q5TYW2 823 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 ANKRD20A3Q5VUR7 823 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 FAM151BQ6UXP7 276 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 ADGRG6Q86SQ4 1221 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 PIM3Q86V86 326 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 C17orf82Q86X59 251 aaPredicted RBP13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 TTC30BQ8N4P2 665 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 TAB3Q8N5C8 712 aaPredicted RBP13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 TTC13Q8NBP0 860 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 RCBTB1Q8NDN9 531 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 GRAMD1AQ96CP6 724 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 SLC46A1Q96NT5 459 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 SLC38A3Q99624 504 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 TRIM39Q9HCM9 518 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 TBC1D29Q9UFV1 150 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 PYCARDQ9ULZ3 195 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 JRKLQ9Y4A0 524 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 PCDHGA8Q9Y5G5 932 aa13.47□□□□□ -0.25
VPS9D1-204ENST00000565023 TMX2-CTNND1H3BSU7 103 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 UGT1A9O60656 530 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 DXOO77932 396 aaKnown RBP13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 CPNE6O95741 557 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 UGT1A6P19224 532 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 HLA-DPA1P20036 260 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 UGT1A1P22309 533 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 UGT1A4P22310 534 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 CCKBRP32239 447 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 UGT1A3P35503 534 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 SPAM1P38567 509 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 ETV5P41161 510 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 SPARCL1Q14515 664 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 PRPSAP1Q14558 356 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 CHRNA6Q15825 494 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 KHDC1Q4VXA5 237 aaKnown RBP13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 SNAP47Q5SQN1 464 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 LRRTM4Q86VH4 590 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 SLC13A5Q86YT5 568 aaPredicted RBP13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 AHCYL2Q96HN2 611 aaKnown RBP13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 FCRL3Q96P31 734 aaPredicted RBP13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 SRPK1Q96SB4 655 aaKnown RBP13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 GORASP1Q9BQQ3 440 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 RMI1Q9H9A7 625 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 UGT1A7Q9HAW7 530 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 UGT1A10Q9HAW8 530 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 UGT1A8Q9HAW9 530 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 PRDM8Q9NQV8 689 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 TMEM9Q9P0T7 183 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 SLC23A2Q9UGH3 650 aa13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 R3HDM2Q9Y2K5 976 aaKnown RBP13.46□□□□□ -0.25
VPS9D1-204ENST00000565023 IGHV1OR21-1A0A087WYE8 117 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms