RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 SLC25A41Q8N5S1 370 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 LSM14AQ8ND56 463 aaKnown RBP9.91□□□□□ -0.82
CMTM3-209ENST00000565003 HTR3CQ8WXA8 447 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 RBM41Q96IZ5 413 aaKnown RBP9.91□□□□□ -0.82
CMTM3-209ENST00000565003 MRGPRX2Q96LB1 330 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 PANX2Q96RD6 677 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 CCNL2Q96S94 520 aaPredicted RBP9.91□□□□□ -0.82
CMTM3-209ENST00000565003 SLC38A3Q99624 504 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 HEMGNQ9BXL5 484 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 C10orf88Q9H8K7 445 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 TRIM39Q9HCM9 518 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 BPIFA1Q9NP55 256 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 SARS2Q9NP81 518 aaKnown RBP9.91□□□□□ -0.82
CMTM3-209ENST00000565003 SLC23A2Q9UGH3 650 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 REXO2Q9Y3B8 237 aaKnown RBP9.91□□□□□ -0.82
CMTM3-209ENST00000565003 DUSP10Q9Y6W6 482 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 SDK2Q58EX2 2172 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 APOC4-APOC2K7ER74 178 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 GPR39O43194 453 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 DUX1O43812 170 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 APOC2P02655 101 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 FGF3P11487 239 aaPredicted RBP9.9□□□□□ -0.82
CMTM3-209ENST00000565003 HMGCLP35914 325 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 ATP13A5Q4VNC0 1218 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 TAF1BQ53T94 588 aaPredicted RBP9.9□□□□□ -0.82
CMTM3-209ENST00000565003 CCDC70Q6NSX1 233 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 TMEM71Q6P5X7 295 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 RAD9BQ6WBX8 426 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 PID1Q7Z2X4 250 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 SLC9B2Q86UD5 537 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 VASH2Q86V25 355 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 DTX1Q86Y01 620 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 ZNF547Q8IVP9 402 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 ZNF843Q8N446 348 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 TTC30BQ8N4P2 665 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 IPMKQ8NFU5 416 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 OR10G6Q8NH81 332 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 ART4Q93070 314 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 MRFAP1L1Q96HT8 127 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 PLEKHG4BQ96PX9 1271 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 FCRL5Q96RD9 977 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 VAT1Q99536 393 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 GORASP1Q9BQQ3 440 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 SEMA4CQ9C0C4 833 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 LACRTQ9GZZ8 138 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 ZMYND15Q9H091 742 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 OSGEPL1Q9H4B0 414 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 LUC7LQ9NQ29 371 aaKnown RBP9.9□□□□□ -0.82
CMTM3-209ENST00000565003 PRDM8Q9NQV8 689 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 RAD18Q9NS91 495 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 KLC4Q9NSK0 619 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 AKAP7Q9P0M2 348 aaPredicted RBP9.9□□□□□ -0.82
CMTM3-209ENST00000565003 SCHIP1Q9P0W5 487 aaPredicted RBP9.9□□□□□ -0.82
CMTM3-209ENST00000565003 PDP2Q9P2J9 529 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 CPNE7Q9UBL6 633 aa9.9□□□□□ -0.82
CMTM3-209ENST00000565003 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.9□□□□□ -0.82
CMTM3-209ENST00000565003 EPN1Q9Y6I3 576 aaPredicted RBP9.9□□□□□ -0.82
CMTM3-209ENST00000565003 KIR2DS5A0A0G2JLQ3 304 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 A0A0G2JNG1 304 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 PRR19A6NJB7 356 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 HACD1B0YJ81 288 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 GPR89AB7ZAQ6 455 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.89□□□□□ -0.83
CMTM3-209ENST00000565003 KIR2DS3K7RE56 304 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 PJA2O43164 708 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 BUD23O43709 281 aaKnown RBP9.89□□□□□ -0.83
CMTM3-209ENST00000565003 VEGFDO43915 354 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 EPOP01588 193 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 GPR89BP0CG08 455 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 WT1P19544 449 aaPredicted RBP9.89□□□□□ -0.83
CMTM3-209ENST00000565003 CD82P27701 267 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 RBL1P28749 1068 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 CA5AP35218 305 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 CLCNKAP51800 687 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 EPHA4P54764 986 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 UBE2IP63279 158 aaKnown RBP9.89□□□□□ -0.83
CMTM3-209ENST00000565003 OTUD4Q01804 1114 aaKnown RBP9.89□□□□□ -0.83
CMTM3-209ENST00000565003 MPP3Q13368 585 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 XRCC4Q13426 336 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 LY6DQ14210 128 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 KIR2DS5Q14953 304 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 SLC1A5Q15758 541 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 SEPT7Q16181 437 aaKnown RBP9.89□□□□□ -0.83
CMTM3-209ENST00000565003 INSCQ1MX18 579 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 AADACL2Q6P093 401 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 WDR74Q6RFH5 385 aaPredicted RBP9.89□□□□□ -0.83
CMTM3-209ENST00000565003 FAM151BQ6UXP7 276 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 GLT6D1Q7Z4J2 308 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 LRRTM4Q86VH4 590 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 FAM129CQ86XR2 697 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 AGBL5Q8NDL9 886 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 ACRBPQ8NEB7 543 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 BLOC1S5Q8TDH9 187 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 ALG3Q92685 438 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 AHCYL2Q96HN2 611 aaKnown RBP9.89□□□□□ -0.83
CMTM3-209ENST00000565003 VPS35Q96QK1 796 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 SRPK1Q96SB4 655 aaKnown RBP9.89□□□□□ -0.83
CMTM3-209ENST00000565003 DPYSL5Q9BPU6 564 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 FAM118BQ9BPY3 351 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 TBC1D10AQ9BXI6 508 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms