RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 PSTKQ8IV42 348 aaKnown RBP16.18■□□□□ 0.18
LINC00554-201ENST00000564841 TTC30BQ8N4P2 665 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 PNPT1Q8TCS8 783 aaKnown RBP16.18■□□□□ 0.18
LINC00554-201ENST00000564841 SLC2A14Q8TDB8 520 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 ALG2Q9H553 416 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 ASB7Q9H672 318 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 EIF2B3Q9NR50 452 aaKnown RBP16.18■□□□□ 0.18
LINC00554-201ENST00000564841 PDE10AQ9Y233 779 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 CITO14578 2027 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 NRCAMQ92823 1304 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 SUPT7LO94864 414 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 F2P00734 622 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 MYCP01106 439 aaPredicted RBP16.18■□□□□ 0.18
LINC00554-201ENST00000564841 STMN1P16949 149 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 PTPN3P26045 913 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 CASP3P42574 277 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 SKIV2LQ15477 1246 aaKnown RBP16.18■□□□□ 0.18
LINC00554-201ENST00000564841 HIST2H2ACQ16777 129 aaPredicted RBP16.18■□□□□ 0.18
LINC00554-201ENST00000564841 SNAP47Q5SQN1 464 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 PIWIL4Q7Z3Z4 852 aaKnown RBP16.18■□□□□ 0.18
LINC00554-201ENST00000564841 CNIH3Q8TBE1 160 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 SH3RF2Q8TEC5 729 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 MUL1Q969V5 352 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 AMBRA1Q9C0C7 1298 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 ABCD2Q9UBJ2 740 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 DKK3Q9UBP4 350 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 GABRQQ9UN88 632 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 BTRCQ9Y297 605 aa16.18■□□□□ 0.18
LINC00554-201ENST00000564841 TTC34A8MYJ7 566 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 FAM72CH0Y354 149 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 IDH3BO43837 385 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 NPHS1O60500 1241 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 DEAF1O75398 565 aaPredicted RBP16.17■□□□□ 0.18
LINC00554-201ENST00000564841 PRKCAP17252 672 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 DIO3P55073 304 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 EMX1Q04741 257 aaPredicted RBP16.17■□□□□ 0.18
LINC00554-201ENST00000564841 SNX17Q15036 470 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 PAGE3Q5JUK9 113 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 FAM72AQ5TYM5 149 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 FAM72DQ6L9T8 149 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 NOTUMQ6P988 496 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 STRADAQ7RTN6 431 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 FAM72BQ86X60 149 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 LYSMD2Q8IV50 215 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 DEFB106AQ8N104 65 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 KCTD14Q9BQ13 255 aaPredicted RBP16.17■□□□□ 0.18
LINC00554-201ENST00000564841 NFKBIZQ9BYH8 718 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 TRIM15Q9C019 465 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 PLSCR3Q9NRY6 295 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 INTS10Q9NVR2 710 aaKnown RBP16.17■□□□□ 0.18
LINC00554-201ENST00000564841 RRN3P2A6NIE6 340 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 UPK1AO00322 258 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 BEST1O76090 585 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 AP2A1O95782 977 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 THRBP10828 461 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 DARSP14868 501 aaKnown RBP16.17■□□□□ 0.18
LINC00554-201ENST00000564841 TRPC1P48995 793 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 OR4D2P58180 307 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 VAC14Q08AM6 782 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 FAM187BQ17R55 369 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 ESRP1Q6NXG1 681 aaKnown RBP16.17■□□□□ 0.18
LINC00554-201ENST00000564841 SLC26A9Q7LBE3 791 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 CCDC103Q8IW40 242 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 SLC38A6Q8IZM9 456 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 C8orf59Q8N0T1 100 aaPredicted RBP16.17■□□□□ 0.18
LINC00554-201ENST00000564841 FAM86B1Q8N7N1 296 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 BEND7Q8N7W2 519 aaPredicted RBP16.17■□□□□ 0.18
LINC00554-201ENST00000564841 VMP1Q96GC9 406 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 TXNDC15Q96J42 360 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 ZBED2Q9BTP6 218 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 NDUFAF1Q9Y375 327 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 N6AMT1Q9Y5N5 214 aa16.17■□□□□ 0.18
LINC00554-201ENST00000564841 PCM1Q15154 2024 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 DPYSL4O14531 572 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 AP3D1O14617 1153 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 SNX2O60749 519 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 CCNKO75909 580 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 NFKB1P19838 968 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 AFF1P51825 1210 aaKnown RBP16.16■□□□□ 0.18
LINC00554-201ENST00000564841 LYPD8Q6UX82 237 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 HFE2Q6ZVN8 426 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 LPPQ93052 612 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 YTHDF1Q9BYJ9 559 aaKnown RBP16.16■□□□□ 0.18
LINC00554-201ENST00000564841 MAGEE1Q9HCI5 957 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 ADPRHL2Q9NX46 363 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 CARD8Q9Y2G2 431 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 ALPLP05186 524 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 HSD17B1P14061 328 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 ATP5F1P24539 256 aaPredicted RBP16.16■□□□□ 0.18
LINC00554-201ENST00000564841 HRH2P25021 359 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 SULT1E1P49888 294 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 ILF2Q12905 390 aaKnown RBP16.16■□□□□ 0.18
LINC00554-201ENST00000564841 PAN2Q504Q3 1202 aaKnown RBP16.16■□□□□ 0.18
LINC00554-201ENST00000564841 SYPL2Q5VXT5 272 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 OTOP3Q7RTS5 596 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 SPATA22Q8NHS9 363 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 SLC35F5Q8WV83 523 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 S100ZQ8WXG8 99 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 TMEM125Q96AQ2 219 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 ATXN3LQ9H3M9 355 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms