RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 ACRBPQ8NEB7 543 aa18.29■□□□□ 0.52
CLN6-204ENST00000564752 OR10G6Q8NH81 332 aa18.29■□□□□ 0.52
CLN6-204ENST00000564752 HTR3CQ8WXA8 447 aa18.29■□□□□ 0.52
CLN6-204ENST00000564752 HAUS1Q96CS2 278 aa18.29■□□□□ 0.52
CLN6-204ENST00000564752 EID2BQ96D98 161 aa18.29■□□□□ 0.52
CLN6-204ENST00000564752 BAG1Q99933 345 aaPredicted RBP18.29■□□□□ 0.52
CLN6-204ENST00000564752 ASPSCR1Q9BZE9 553 aa18.29■□□□□ 0.52
CLN6-204ENST00000564752 GLOD4Q9HC38 313 aa18.29■□□□□ 0.52
CLN6-204ENST00000564752 SARS2Q9NP81 518 aaKnown RBP18.29■□□□□ 0.52
CLN6-204ENST00000564752 STARD5Q9NSY2 213 aa18.29■□□□□ 0.52
CLN6-204ENST00000564752 SLC39A1Q9NY26 324 aa18.29■□□□□ 0.52
CLN6-204ENST00000564752 REXO2Q9Y3B8 237 aaKnown RBP18.29■□□□□ 0.52
CLN6-204ENST00000564752 SPTA1P02549 2419 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 A6NCN8 305 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 EFCAB7A8K855 629 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 MTSS1O43312 755 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 DUX1O43812 170 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 SLC28A2O43868 658 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 CTNNA1P35221 906 aaKnown RBP18.28■□□□□ 0.52
CLN6-204ENST00000564752 UGT1A3P35503 534 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 ATP1A2P50993 1020 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 VAV2P52735 878 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 HHEXQ03014 270 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 ADCY2Q08462 1091 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 NFATC3Q12968 1075 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 SLC14A2Q15849 920 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 PPP2R5EQ16537 467 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 LYSMD3Q7Z3D4 306 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 KDELC2Q7Z4H8 507 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 ARHGAP22Q7Z5H3 698 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 KIAA1328Q86T90 577 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 ZC3H18Q86VM9 953 aaKnown RBP18.28■□□□□ 0.52
CLN6-204ENST00000564752 SH3KBP1Q96B97 665 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 TRIB3Q96RU7 358 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 KCNK6Q9Y257 313 aa18.28■□□□□ 0.52
CLN6-204ENST00000564752 TLN1Q9Y490 2541 aaKnown RBP18.27■□□□□ 0.52
CLN6-204ENST00000564752 BTNL10A8MVZ5 291 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 NUAK1O60285 661 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 MT-CYBP00156 380 aaPredicted RBP18.27■□□□□ 0.52
CLN6-204ENST00000564752 SLC4A1P02730 911 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 FAM87AP0C7U9 286 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 SFTPCP11686 197 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 ACP5P13686 325 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 CDK18Q07002 472 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 NFATC2Q13469 925 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 DCAF12Q5T6F0 453 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 CCDC181Q5TID7 509 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 SLC9B2Q86UD5 537 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 FAM129CQ86XR2 697 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 BMPERQ8N8U9 685 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 SPATA22Q8NHS9 363 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 TEKT5Q96M29 485 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 QKIQ96PU8 341 aaKnown RBP eCLIP18.27■□□□□ 0.52
CLN6-204ENST00000564752 HERPUD2Q9BSE4 406 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 SLC12A9Q9BXP2 914 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 CARD9Q9H257 536 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 CLMPQ9H6B4 373 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 ZFYVE1Q9HBF4 777 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 KLHL8Q9P2G9 620 aaPredicted RBP18.27■□□□□ 0.52
CLN6-204ENST00000564752 DUSP10Q9Y6W6 482 aa18.27■□□□□ 0.52
CLN6-204ENST00000564752 KIR2DS5A0A0G2JLQ3 304 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 A0A0G2JNG1 304 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 MACROD2A1Z1Q3 448 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 KIR2DS3K7RE56 304 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 GRID2O43424 1007 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 SLC2A4P14672 509 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 CDC25BP30305 580 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 PPM1FP49593 454 aaPredicted RBP18.26■□□□□ 0.51
CLN6-204ENST00000564752 CLCNKAP51800 687 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 EPHA4P54764 986 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 RAB15P59190 212 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 COPS2P61201 443 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 WASHC5Q12768 1159 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 KIR2DS5Q14953 304 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 ANKS6Q68DC2 871 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 CCDC70Q6NSX1 233 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 BBS12Q6ZW61 710 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 CACNA2D3Q8IZS8 1091 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 IL22RA1Q8N6P7 574 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 SPC24Q8NBT2 197 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 GPR26Q8NDV2 337 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 NCSTNQ92542 709 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 TADA1Q96BN2 335 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 HEMGNQ9BXL5 484 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 SPRY4Q9C004 299 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 FAM117AQ9C073 453 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 LACRTQ9GZZ8 138 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 ZMYND15Q9H091 742 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 STN1Q9H668 368 aaKnown RBP18.26■□□□□ 0.51
CLN6-204ENST00000564752 IMPACTQ9P2X3 320 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 ATXN10Q9UBB4 475 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 PCDHA3Q9Y5H8 950 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 HEMK1Q9Y5R4 338 aaPredicted RBP18.26■□□□□ 0.51
CLN6-204ENST00000564752 ADGRG1Q9Y653 693 aa18.26■□□□□ 0.51
CLN6-204ENST00000564752 SDK2Q58EX2 2172 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 ZFC3H1O60293 1989 aaKnown RBP18.25■□□□□ 0.51
CLN6-204ENST00000564752 CCDC66A2RUB6 948 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 OR5K4A6NMS3 321 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 A8MU76 341 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 HACD1B0YJ81 288 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms