RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 LILRA5A6NI73 299 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 TOX3O15405 576 aaPredicted RBP12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 SPOPO43791 374 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 SNX2O60749 519 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 EML2O95834 649 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 COMTP21964 271 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 PTPN3P26045 913 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 MAP4P27816 1152 aaKnown RBP12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 CSF2RBP32927 897 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 HMGCLP35914 325 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 CDKN2BP42772 138 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 NFATC2Q13469 925 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 PRKD1Q15139 912 aaPredicted RBP12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 LINC00303Q3SY05 128 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 MFSD7Q6UXD7 560 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 CEACAM20Q6UY09 585 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 RCOR2Q8IZ40 523 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 BMPERQ8N8U9 685 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 GPR26Q8NDV2 337 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 NCSTNQ92542 709 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 ART4Q93070 314 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 RNF25Q96BH1 459 aaPredicted RBP12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 VPS35Q96QK1 796 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 TIMM29Q9BSF4 260 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 SEMA4CQ9C0C4 833 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 KLC4Q9NSK0 619 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 HACD3Q9P035 362 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 FAM153AQ9UHL3 310 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 SHOC2Q9UQ13 582 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 KCNK6Q9Y257 313 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 ZNF711Q9Y462 761 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 PRKAB1Q9Y478 270 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 B3GALT1Q9Y5Z6 326 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 ALG6Q9Y672 507 aa12.03□□□□□ -0.48
GTF3C1-204ENST00000564664 EFCAB7A8K855 629 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 HACD1B0YJ81 288 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 CST8O60676 142 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 PPFIA2O75334 1257 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 ZRANB2O95218 330 aaKnown RBP eCLIP12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 ANKRD34CP0C6C1 535 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 ZNF7P17097 686 aaPredicted RBP12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 BPIP17213 487 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 VCLP18206 1134 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 UGT1A3P35503 534 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 MAGEA1P43355 309 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 NOP2P46087 812 aaKnown RBP12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 PPM1FP49593 454 aaPredicted RBP12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 UBE2IP63279 158 aaKnown RBP12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 TBX2Q13207 712 aaPredicted RBP12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 PCSK7Q16549 785 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 TFDP3Q5H9I0 405 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 AGAP9Q5VTM2 703 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 ABRAXAS1Q6UWZ7 409 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 NPNTQ6UXI9 565 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 KDELC2Q7Z4H8 507 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 LRRTM4Q86VH4 590 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 FAM129CQ86XR2 697 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 CCDC170Q8IYT3 715 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 CACNA2D3Q8IZS8 1091 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 IL22RA1Q8N6P7 574 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 EXD3Q8N9H8 876 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 P3H4Q92791 437 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 CATSPER2Q96P56 530 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 FCRL5Q96RD9 977 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 SPRY4Q9C004 299 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 ZMYND15Q9H091 742 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 ADNPQ9H2P0 1102 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 LUC7LQ9NQ29 371 aaKnown RBP12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 PRDM8Q9NQV8 689 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 OCIAD1Q9NX40 245 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 TRHDEQ9UKU6 1024 aa12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 PCYT1BQ9Y5K3 369 aaPredicted RBP12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 DNMT3AQ9Y6K1 912 aaPredicted RBP12.02□□□□□ -0.49
GTF3C1-204ENST00000564664 AGRPO00253 132 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 CDK14O94921 469 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 LCA5LO95447 670 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 MT-CYBP00156 380 aaPredicted RBP12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 VIPP01282 170 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 IDSP22304 550 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 MPSTP25325 297 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 ARSDP51689 593 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 DYNLT1P63172 113 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 XRCC4Q13426 336 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 MAP7Q14244 749 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 TBR1Q16650 682 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 ALS2CLQ60I27 953 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 SPOCD1Q6ZMY3 1216 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 TMEM26Q6ZUK4 368 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 VASH2Q86V25 355 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 KATNAL2Q8IYT4 538 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 SPATA22Q8NHS9 363 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 EXTL1Q92935 676 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 RTP4Q96DX8 246 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 RBM41Q96IZ5 413 aaKnown RBP12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 TTC25Q96NG3 672 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 FERMT1Q9BQL6 677 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 SLC12A9Q9BXP2 914 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 CEP41Q9BYV8 373 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 FAM117AQ9C073 453 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms