RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 FEZ2Q9UHY8 353 aaPredicted RBP18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 ATXN7L1Q9ULK2 861 aaPredicted RBP18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 ARL5AQ9Y689 179 aa18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 GOLGA6L3A6NEY3 463 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 CHUKO15111 745 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 PSMD3O43242 534 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 B4GAT1O43505 415 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 METTL18O95568 372 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 CRTAMO95727 393 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 SLC2A4P14672 509 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 RBMS1P29558 406 aaKnown RBP18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 GPR3P46089 330 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 GDF10P55107 478 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 OR1D5P58170 312 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 B4GALNT1Q00973 533 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 PDE1BQ01064 536 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 TMEM115Q12893 351 aaPredicted RBP18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 INSCQ1MX18 579 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 AMZ1Q400G9 498 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 ZNF438Q7Z4V0 828 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 PIM3Q86V86 326 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 LRRTM4Q86VH4 590 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 TRIM58Q8NG06 486 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 OR4K2Q8NGD2 314 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 WDR36Q8NI36 951 aaKnown RBP18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 ATG4AQ8WYN0 398 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 FGF11Q92914 225 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 FOXP3Q9BZS1 431 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 OSGEPL1Q9H4B0 414 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 EPB41L5Q9HCM4 733 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 KLC4Q9NSK0 619 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 TBC1D29Q9UFV1 150 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 ZNF148Q9UQR1 794 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 PPP2R2CQ9Y2T4 447 aa18.12■□□□□ 0.49
SYNGR3-204ENST00000564642 CCDC187A0A096LP49 1063 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 PPM1DO15297 605 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 RRP8O43159 456 aaKnown RBP18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 LIASO43766 372 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 UGT1A9O60656 530 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 ZNF7P17097 686 aaPredicted RBP18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 UGT1A6P19224 532 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 UGT1A1P22309 533 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 UGT1A4P22310 534 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 UGT1A3P35503 534 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 UGT1A5P35504 534 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 CLCNKAP51800 687 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 PDX1P52945 283 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 PTPRCAPQ14761 206 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 NR1D2Q14995 579 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 TBC1D25Q3MII6 688 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 PLA2G4EQ3MJ16 856 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 MAP9Q49MG5 647 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 LDLRAP1Q5SW96 308 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 IYDQ6PHW0 289 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 B3GNT8Q7Z7M8 397 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 SFRP1Q8N474 314 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 SLC37A2Q8TED4 501 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 C1orf54Q8WWF1 131 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 ZNF578Q96N58 590 aaPredicted RBP18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 ZCCHC2Q9C0B9 1178 aaKnown RBP18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 STN1Q9H668 368 aaKnown RBP18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 LRRC40Q9H9A6 602 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 UGT1A7Q9HAW7 530 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 UGT1A10Q9HAW8 530 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 UGT1A8Q9HAW9 530 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 ARNT2Q9HBZ2 717 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 TMPRSS11EQ9UL52 423 aa18.11■□□□□ 0.49
SYNGR3-204ENST00000564642 OR5K4A6NMS3 321 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 TLX3O43711 291 aaPredicted RBP18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 DXOO77932 396 aaKnown RBP18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 CPNE6O95741 557 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 EML2O95834 649 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 F3P13726 295 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 CCKBRP32239 447 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 FASLGP48023 281 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 PPM1FP49593 454 aaPredicted RBP18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 EIF3IQ13347 325 aaKnown RBP18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 SNX1Q13596 522 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 KHDC1Q4VXA5 237 aaKnown RBP18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 KCTD11Q693B1 232 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 DENND5AQ6IQ26 1287 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 LRRC69Q6ZNQ3 347 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 USP53Q70EK8 1073 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 SLC9B2Q86UD5 537 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 TRAPPC5Q8IUR0 188 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 KLHDC8BQ8IXV7 354 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 TAB3Q8N5C8 712 aaPredicted RBP18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 ZNF398Q8TD17 642 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 HNRNPLLQ8WVV9 542 aaKnown RBP18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 LIN37Q96GY3 246 aaPredicted RBP18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 SLC38A3Q99624 504 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 THSD1Q9NS62 852 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 KCNK4Q9NYG8 393 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 DNAJC16Q9Y2G8 782 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 PCDHGA8Q9Y5G5 932 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 GCN1Q92616 2671 aaKnown RBP18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 KIF26BQ2KJY2 2108 aa18.1■□□□□ 0.49
SYNGR3-204ENST00000564642 ZNF106Q9H2Y7 1883 aaKnown RBP18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 KIR2DS5A0A0G2JLQ3 304 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 A0A0G2JNG1 304 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms