RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 EGLN2Q96KS0 407 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 DUX3Q96PT4 197 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 PDZD7Q9H5P4 517 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 TFB2MQ9H5Q4 396 aaKnown RBP4.55□□□□□ -1.68
UBR1-205ENST00000564540 FAM118AQ9NWS6 357 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 DDX43Q9NXZ2 648 aaKnown RBP4.55□□□□□ -1.68
UBR1-205ENST00000564540 MAP3K20Q9NYL2 800 aaKnown RBP4.55□□□□□ -1.68
UBR1-205ENST00000564540 R3HDM2Q9Y2K5 976 aaKnown RBP4.55□□□□□ -1.68
UBR1-205ENST00000564540 PMS2P5A8MQ11 134 aa4.54□□□□□ -1.68
UBR1-205ENST00000564540 CTSVO60911 334 aa4.54□□□□□ -1.68
UBR1-205ENST00000564540 WISP2O76076 250 aa4.54□□□□□ -1.68
UBR1-205ENST00000564540 APOHP02749 345 aaPredicted RBP4.54□□□□□ -1.68
UBR1-205ENST00000564540 CLEC3BP05452 202 aa4.54□□□□□ -1.68
UBR1-205ENST00000564540 DCTP40126 519 aa4.54□□□□□ -1.68
UBR1-205ENST00000564540 PRCPP42785 496 aa4.54□□□□□ -1.68
UBR1-205ENST00000564540 PDE1CQ14123 709 aaPredicted RBP4.54□□□□□ -1.68
UBR1-205ENST00000564540 MED22Q15528 200 aa4.54□□□□□ -1.68
UBR1-205ENST00000564540 CCNYL2Q5T2Q4 361 aa4.54□□□□□ -1.68
UBR1-205ENST00000564540 PIWIL4Q7Z3Z4 852 aaKnown RBP4.54□□□□□ -1.68
UBR1-205ENST00000564540 RASGEF1CQ8N431 466 aa4.54□□□□□ -1.68
UBR1-205ENST00000564540 FRMD1Q8N878 549 aa4.54□□□□□ -1.68
UBR1-205ENST00000564540 OR10V1Q8NGI7 309 aa4.54□□□□□ -1.68
UBR1-205ENST00000564540 DNAAF4Q8WXU2 420 aa4.54□□□□□ -1.68
UBR1-205ENST00000564540 ZKSCAN4Q969J2 545 aaPredicted RBP4.54□□□□□ -1.68
UBR1-205ENST00000564540 SLC26A6Q9BXS9 759 aa4.54□□□□□ -1.68
UBR1-205ENST00000564540 CWC15Q9P013 229 aaKnown RBP4.54□□□□□ -1.68
UBR1-205ENST00000564540 TMEM98Q9Y2Y6 226 aa4.54□□□□□ -1.68
UBR1-205ENST00000564540 SMCHD1A6NHR9 2005 aa4.54□□□□□ -1.68
UBR1-205ENST00000564540 GM2AP17900 193 aa4.53□□□□□ -1.68
UBR1-205ENST00000564540 ELF1P32519 619 aa4.53□□□□□ -1.68
UBR1-205ENST00000564540 TAS2R40P59535 323 aa4.53□□□□□ -1.68
UBR1-205ENST00000564540 MRPS34P82930 218 aaKnown RBP4.53□□□□□ -1.68
UBR1-205ENST00000564540 GOLGA8DPQ0D2H9 430 aa4.53□□□□□ -1.68
UBR1-205ENST00000564540 ALFQ53S48 1182 aa4.53□□□□□ -1.68
UBR1-205ENST00000564540 SLC35E4Q6ICL7 350 aa4.53□□□□□ -1.68
UBR1-205ENST00000564540 CEACAM20Q6UY09 585 aa4.53□□□□□ -1.68
UBR1-205ENST00000564540 Q75L30 129 aa4.53□□□□□ -1.68
UBR1-205ENST00000564540 CPLX4Q7Z7G2 160 aa4.53□□□□□ -1.68
UBR1-205ENST00000564540 NAXEQ8NCW5 288 aa4.53□□□□□ -1.68
UBR1-205ENST00000564540 SCRN2Q96FV2 425 aa4.53□□□□□ -1.68
UBR1-205ENST00000564540 OXNAD1Q96HP4 312 aaPredicted RBP4.53□□□□□ -1.68
UBR1-205ENST00000564540 SIL1Q9H173 461 aa4.53□□□□□ -1.68
UBR1-205ENST00000564540 TRPC7Q9HCX4 862 aa4.53□□□□□ -1.68
UBR1-205ENST00000564540 MTMR10Q9NXD2 777 aa4.53□□□□□ -1.68
UBR1-205ENST00000564540 PIAS3Q9Y6X2 628 aa4.53□□□□□ -1.68
UBR1-205ENST00000564540 PRAG1Q86YV5 1406 aa4.53□□□□□ -1.68
UBR1-205ENST00000564540 PLPP2O43688 288 aa4.52□□□□□ -1.69
UBR1-205ENST00000564540 EDIL3O43854 480 aa4.52□□□□□ -1.69
UBR1-205ENST00000564540 PRKNO60260 465 aaPredicted RBP4.52□□□□□ -1.69
UBR1-205ENST00000564540 BAG4O95429 457 aaKnown RBP4.52□□□□□ -1.69
UBR1-205ENST00000564540 ACVR2BQ13705 512 aa4.52□□□□□ -1.69
UBR1-205ENST00000564540 NAB2Q15742 525 aa4.52□□□□□ -1.69
UBR1-205ENST00000564540 WDR38Q5JTN6 314 aa4.52□□□□□ -1.69
UBR1-205ENST00000564540 SLC27A1Q6PCB7 646 aa4.52□□□□□ -1.69
UBR1-205ENST00000564540 PLEKHM3Q6ZWE6 761 aa4.52□□□□□ -1.69
UBR1-205ENST00000564540 ANO5Q75V66 913 aa4.52□□□□□ -1.69
UBR1-205ENST00000564540 ARHGAP12Q8IWW6 846 aa4.52□□□□□ -1.69
UBR1-205ENST00000564540 OR8K5Q8NH50 307 aa4.52□□□□□ -1.69
UBR1-205ENST00000564540 STAMBPL1Q96FJ0 436 aa4.52□□□□□ -1.69
UBR1-205ENST00000564540 PPM1MQ96MI6 270 aa4.52□□□□□ -1.69
UBR1-205ENST00000564540 F2RL3Q96RI0 385 aa4.52□□□□□ -1.69
UBR1-205ENST00000564540 SEPT5Q99719 369 aaPredicted RBP4.52□□□□□ -1.69
UBR1-205ENST00000564540 SEMA3CQ99985 751 aa4.52□□□□□ -1.69
UBR1-205ENST00000564540 MYH16Q9H6N6 1097 aa4.52□□□□□ -1.69
UBR1-205ENST00000564540 MAGIXQ9H6Y5 334 aa4.52□□□□□ -1.69
UBR1-205ENST00000564540 RRP7BPQ9NSQ0 103 aa4.52□□□□□ -1.69
UBR1-205ENST00000564540 FBXW11Q9UKB1 542 aa4.52□□□□□ -1.69
UBR1-205ENST00000564540 B3GALT5Q9Y2C3 310 aa4.52□□□□□ -1.69
UBR1-205ENST00000564540 KANSL1LA0AUZ9 987 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 CCDC189A1A4V9 331 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 HCRTR2O43614 444 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 NDUFS3O75489 264 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 TBX18O95935 607 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 CSF2RAP15509 400 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 NR2F2P24468 414 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 KRT9P35527 623 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 PIK3CAP42336 1068 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 NR0B1P51843 470 aaKnown RBP4.51□□□□□ -1.69
UBR1-205ENST00000564540 ZBED6P86452 979 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 NIPAL4Q0D2K0 466 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 ADIPOQQ15848 244 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 SOWAHCQ53LP3 525 aaPredicted RBP4.51□□□□□ -1.69
UBR1-205ENST00000564540 ARHGAP17Q68EM7 881 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 FBXL22Q6P050 247 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 PLXDC2Q6UX71 529 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 PM20D2Q8IYS1 436 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 GBGT1Q8N5D6 347 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 EMC1Q8N766 993 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 FAM76AQ8TAV0 307 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 TM9SF4Q92544 642 aa4.51□□□□□ -1.69
UBR1-205ENST00000564540 UBA2Q9UBT2 640 aaPredicted RBP4.51□□□□□ -1.69
UBR1-205ENST00000564540 EIF2S1P05198 315 aaKnown RBP4.5□□□□□ -1.69
UBR1-205ENST00000564540 TUBBP07437 444 aa4.5□□□□□ -1.69
UBR1-205ENST00000564540 PATE4P0C8F1 98 aa4.5□□□□□ -1.69
UBR1-205ENST00000564540 HSPA1AP0DMV8 641 aaKnown RBP4.5□□□□□ -1.69
UBR1-205ENST00000564540 HSPA1BP0DMV9 641 aaKnown RBP4.5□□□□□ -1.69
UBR1-205ENST00000564540 ZNF23P17027 643 aa4.5□□□□□ -1.69
UBR1-205ENST00000564540 MCCP23508 829 aa4.5□□□□□ -1.69
UBR1-205ENST00000564540 GALCP54803 685 aa4.5□□□□□ -1.69
UBR1-205ENST00000564540 CD81P60033 236 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms