RNA–Protein interactions for RNA: ENST00000563724.1

LINC02516-201, Transcript of long intergenic non-protein coding RNA 2516, humanhuman

TSL 2 BASIC

Gene LINC02516, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02516-201ENST00000563724 SMAD9O15198 467 aaKnown RBP4.28□□□□□ -1.72
LINC02516-201ENST00000563724 RNMTO43148 476 aaKnown RBP4.28□□□□□ -1.72
LINC02516-201ENST00000563724 FOXS1O43638 330 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 PEX1O43933 1283 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 KLK8O60259 260 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 MED24O75448 989 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 CRCPO75575 148 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 SPDEFO95238 335 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 APBB3O95704 486 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 GH1P01241 217 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 VCLP18206 1134 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 AHCYP23526 432 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 PCSK6P29122 969 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 WNT5AP41221 380 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 ARFIP1P53367 373 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 CTSWP56202 376 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 PPP2R2BQ00005 443 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 SREBF2Q12772 1141 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 PFKFB3Q16875 520 aaPredicted RBP4.28□□□□□ -1.72
LINC02516-201ENST00000563724 PCID2Q5JVF3 399 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 RNASEH2BQ5TBB1 312 aaKnown RBP4.28□□□□□ -1.72
LINC02516-201ENST00000563724 CASC4Q6P4E1 433 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 MEX3BQ6ZN04 569 aaKnown RBP4.28□□□□□ -1.72
LINC02516-201ENST00000563724 DPPA4Q7L190 304 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 TRIM74Q86UV6 250 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 TRIM73Q86UV7 250 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 CIR1Q86X95 450 aaPredicted RBP4.28□□□□□ -1.72
LINC02516-201ENST00000563724 TMC8Q8IU68 726 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 GMCL1P1Q8NEA9 526 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 NCOA7Q8NI08 942 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 WIPF2Q8TF74 440 aaPredicted RBP4.28□□□□□ -1.72
LINC02516-201ENST00000563724 TFAP2BQ92481 460 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 ST6GALNAC6Q969X2 333 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 CDCA5Q96FF9 252 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 BSCL2Q96G97 398 aaPredicted RBP4.28□□□□□ -1.72
LINC02516-201ENST00000563724 VCPIP1Q96JH7 1222 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 MS4A10Q96PG2 267 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 DDOQ99489 341 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 TMEM79Q9BSE2 394 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 CRACR2AQ9BSW2 395 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 OSBPL8Q9BZF1 889 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 KLC2Q9H0B6 622 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 MMRN2Q9H8L6 949 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 ACTR5Q9H9F9 607 aaPredicted RBP4.28□□□□□ -1.72
LINC02516-201ENST00000563724 ZNF304Q9HCX3 659 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 DNAJC11Q9NVH1 559 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 TESQ9UGI8 421 aaKnown RBP4.28□□□□□ -1.72
LINC02516-201ENST00000563724 POLLQ9UGP5 575 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 RAPGEFL1Q9UHV5 662 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 TEX264Q9Y6I9 313 aa4.28□□□□□ -1.72
LINC02516-201ENST00000563724 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.27□□□□□ -1.73
LINC02516-201ENST00000563724 RASGRF2O14827 1237 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 MCF2LO15068 1137 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 MPPED1O15442 326 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 RIPK2O43353 540 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 TMCC1O94876 653 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 SNX4O95219 450 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 SLC16A8O95907 504 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 FGBP02675 491 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 ETS1P14921 441 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 NR2F2P24468 414 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 RPA1P27694 616 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 GPR12P47775 334 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 IFNAR2P48551 515 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 CYP4F2P78329 520 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 LARS2Q15031 903 aaKnown RBP4.27□□□□□ -1.73
LINC02516-201ENST00000563724 ARHGEF6Q15052 776 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 TRADDQ15628 312 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 UGCGQ16739 394 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 CDO1Q16878 200 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 ZXDCQ2QGD7 858 aaPredicted RBP4.27□□□□□ -1.73
LINC02516-201ENST00000563724 PLEKHO1Q53GL0 409 aaPredicted RBP4.27□□□□□ -1.73
LINC02516-201ENST00000563724 ESCO2Q56NI9 601 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 PRAMEF19Q5SWL8 479 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 SLC27A1Q6PCB7 646 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 TMEM182Q6ZP80 229 aaPredicted RBP4.27□□□□□ -1.73
LINC02516-201ENST00000563724 RGS9BPQ6ZS82 235 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 LINGO2Q7L985 606 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 TFAP2DQ7Z6R9 452 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 TLK2Q86UE8 772 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 CCDC83Q8IWF9 413 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 TERB1Q8NA31 727 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 KIAA1524Q8TCG1 905 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 KAT2BQ92831 832 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 P2RY11Q96G91 374 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 FAM89AQ96GI7 184 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 KLHL5Q96PQ7 755 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 SMC6Q96SB8 1091 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 PKP2Q99959 881 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 GATA5Q9BWX5 397 aaPredicted RBP4.27□□□□□ -1.73
LINC02516-201ENST00000563724 KRTAP4-7Q9BYR0 210 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 CDT1Q9H211 546 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 VPS33BQ9H267 617 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 PRMT8Q9NR22 394 aaPredicted RBP4.27□□□□□ -1.73
LINC02516-201ENST00000563724 SLC35D1Q9NTN3 355 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 TMEM161AQ9NX61 479 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 KCTD5Q9NXV2 234 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.27□□□□□ -1.73
LINC02516-201ENST00000563724 SPG21Q9NZD8 308 aa4.27□□□□□ -1.73
LINC02516-201ENST00000563724 SPASTQ9UBP0 616 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms