RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 PLXDC2Q6UX71 529 aa3.07□□□□□ -1.92
HMGB1P33-201ENST00000563485 HEATR4Q86WZ0 1026 aa3.07□□□□□ -1.92
HMGB1P33-201ENST00000563485 CNTROBQ8N137 903 aa3.07□□□□□ -1.92
HMGB1P33-201ENST00000563485 MAPK1IP1LQ8NDC0 245 aa3.07□□□□□ -1.92
HMGB1P33-201ENST00000563485 UTP15Q8TED0 518 aaKnown RBP3.07□□□□□ -1.92
HMGB1P33-201ENST00000563485 MMABQ96EY8 250 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P33-201ENST00000563485 SENP5Q96HI0 755 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P33-201ENST00000563485 OXNAD1Q96HP4 312 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P33-201ENST00000563485 TMEM68Q96MH6 324 aa3.07□□□□□ -1.92
HMGB1P33-201ENST00000563485 ZNF599Q96NL3 588 aa3.07□□□□□ -1.92
HMGB1P33-201ENST00000563485 SCPEP1Q9HB40 452 aa3.07□□□□□ -1.92
HMGB1P33-201ENST00000563485 TRPC7Q9HCX4 862 aa3.07□□□□□ -1.92
HMGB1P33-201ENST00000563485 STK39Q9UEW8 545 aa3.07□□□□□ -1.92
HMGB1P33-201ENST00000563485 CNOT8Q9UFF9 292 aaKnown RBP3.07□□□□□ -1.92
HMGB1P33-201ENST00000563485 ARHGAP26Q9UNA1 814 aa3.07□□□□□ -1.92
HMGB1P33-201ENST00000563485 C2CD2Q9Y426 696 aa3.07□□□□□ -1.92
HMGB1P33-201ENST00000563485 CLIC4Q9Y696 253 aa3.07□□□□□ -1.92
HMGB1P33-201ENST00000563485 KDM3AQ9Y4C1 1321 aa3.07□□□□□ -1.92
HMGB1P33-201ENST00000563485 A0A1B0GVY2 172 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 NR5A2O00482 541 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 CACNA1FO60840 1977 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 WISP2O76076 250 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 PDE9AO76083 593 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 TSHBP01222 138 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 NR3C1P04150 777 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 PYGLP06737 847 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 KRT5P13647 590 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 MCCP23508 829 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 NR2F2P24468 414 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 F2RL1P55085 397 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 MLLT10P55197 1068 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 SPOCK1Q08629 439 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 FRG1Q14331 258 aaKnown RBP3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 NSUN5P2Q63ZY6 315 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 INO80CQ6PI98 192 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 Q75L30 129 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 GSTA5Q7RTV2 222 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 ESX1Q8N693 406 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 OR1J2Q8NGS2 313 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 ABHD8Q96I13 439 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 PIP5K1AQ99755 562 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 ASCL2Q99929 193 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 PAIP1Q9H074 479 aaKnown RBP3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 PIGMQ9H3S5 423 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 WASH6PQ9NQA3 447 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 COPG2Q9UBF2 871 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 ACAD8Q9UKU7 415 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 MAU2Q9Y6X3 613 aa3.06□□□□□ -1.92
HMGB1P33-201ENST00000563485 PRAG1Q86YV5 1406 aa3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 A0A0G2JLW4 131 aa3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 A0A0G2JNG1 304 aa3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 DUXAA6NLW8 204 aa3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 EIF4E1BA6NMX2 242 aaKnown RBP3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 ATP2A1O14983 1001 aa3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 TGFB1I1O43294 461 aa3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 SYNCRIPO60506 623 aaKnown RBP3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 PAGE4O60829 102 aa3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 IGLV1-44P01699 117 aa3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 MSH3P20585 1137 aa3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 PPM1FP49593 454 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 RARSP54136 660 aaKnown RBP3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 PDE1CQ14123 709 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 KIR2DS5Q14953 304 aa3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 SDCCAG8Q86SQ7 713 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 LONP2Q86WA8 852 aa3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 ZNF354CQ86Y25 554 aa3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 WDR20Q8TBZ3 569 aa3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 ANKRD9Q96BM1 317 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 PSD2Q9BQI7 771 aa3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 STRA6Q9BX79 667 aa3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 AGXT2Q9BYV1 514 aa3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 ADPRHL2Q9NX46 363 aa3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 DLGAP2Q9P1A6 1054 aa3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 LRRFIP2Q9Y608 721 aaKnown RBP3.05□□□□□ -1.92
HMGB1P33-201ENST00000563485 A0A1W2PRG0 241 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 NPIPB15A6NHN6 443 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 ANKRD66B4E2M5 251 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 CRLF1O75462 422 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 ZNF821O75541 412 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 JRKO75564 520 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 ICAM1P05362 532 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 KRT19P08727 400 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 XBP1P17861 261 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 ELF1P32519 619 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 MAP2K2P36507 400 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 NR2C2P49116 596 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 KRTAP10-3P60369 221 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 OLR1P78380 273 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 CEBPZQ03701 1054 aaKnown RBP3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 TMEM115Q12893 351 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 PNLIPRP3Q17RR3 467 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 DPCR1Q3MIW9 517 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 RAB6CQ53S08 254 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 ZNF805Q5CZA5 627 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 ZNF790Q6PG37 636 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 ARMC8Q8IUR7 673 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 PM20D2Q8IYS1 436 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 GBGT1Q8N5D6 347 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 HM13Q8TCT9 377 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 ZNF473Q8WTR7 871 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms