RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 SNX20Q7Z614 316 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 C7orf61Q8IZ16 206 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 SNX31Q8N9S9 440 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 CHST14Q8NCH0 376 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 STMN2Q93045 179 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 ECHDC3Q96DC8 303 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 ZDHHC6Q9H6R6 413 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 SPHK2Q9NRA0 654 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 DNAJC15Q9Y5T4 150 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 COMMD10Q9Y6G5 202 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 WASF2Q9Y6W5 498 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 PIKFYVEQ9Y2I7 2098 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 CCNT2O60583 730 aaKnown RBP18.94■□□□□ 0.62
SMPD3-203ENST00000563226 TBX10O75333 385 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 RPS17P08708 135 aaKnown RBP18.94■□□□□ 0.62
SMPD3-203ENST00000563226 ADSLP30566 484 aaPredicted RBP18.94■□□□□ 0.62
SMPD3-203ENST00000563226 CLCQ05315 142 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 CBX2Q14781 532 aaPredicted RBP18.94■□□□□ 0.62
SMPD3-203ENST00000563226 LRRC73Q5JTD7 316 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 TMEM215Q68D42 235 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 CERS6Q6ZMG9 384 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 GK5Q6ZS86 529 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 Q6ZVU0 165 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 CLDN19Q8N6F1 224 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.94■□□□□ 0.62
SMPD3-203ENST00000563226 ESAMQ96AP7 390 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 ISG20Q96AZ6 181 aaKnown RBP18.94■□□□□ 0.62
SMPD3-203ENST00000563226 CCDC124Q96CT7 223 aaKnown RBP18.94■□□□□ 0.62
SMPD3-203ENST00000563226 C19orf60Q96EN9 201 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 SUV39H2Q9H5I1 410 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 FBRSL1Q9HCM7 1045 aaKnown RBP18.94■□□□□ 0.62
SMPD3-203ENST00000563226 SEMA4BQ9NPR2 832 aaPredicted RBP18.94■□□□□ 0.62
SMPD3-203ENST00000563226 SLC25A13Q9UJS0 675 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 PACSIN3Q9UKS6 424 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 ASB1Q9Y576 335 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 GLYATL1P3A0A0U1RQE8 302 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 KLK8O60259 260 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 FGF19O95750 216 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 CEBPBP17676 345 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 LHCGRP22888 699 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 HERC3Q15034 1050 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 RFLNAQ6ZTI6 216 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 ADIPOR2Q86V24 386 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 HPS6Q86YV9 775 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 CLYBLQ8N0X4 340 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 NAT16Q8N8M0 369 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 GPR26Q8NDV2 337 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 GIMAP2Q9UG22 337 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 DHRS7Q9Y394 339 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 TRBV5-4A0A0C4DH59 114 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 SYCE1LA8MT33 242 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 AZIN1O14977 448 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 UGT2B4P06133 528 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 CHRM1P11229 460 aaPredicted RBP18.93■□□□□ 0.62
SMPD3-203ENST00000563226 ITGALP20701 1170 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 CCNG1P51959 295 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 TCHHL1Q5QJ38 904 aaPredicted RBP18.93■□□□□ 0.62
SMPD3-203ENST00000563226 C6orf163Q5TEZ5 329 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 LRRC66Q68CR7 880 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 PTRHD1Q6GMV3 140 aaKnown RBP18.93■□□□□ 0.62
SMPD3-203ENST00000563226 LARP4Q71RC2 724 aaKnown RBP eCLIP18.93■□□□□ 0.62
SMPD3-203ENST00000563226 MYLK4Q86YV6 388 aaPredicted RBP18.93■□□□□ 0.62
SMPD3-203ENST00000563226 DSELQ8IZU8 1212 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 NRG4Q8WWG1 115 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 PLEKHG4BQ96PX9 1271 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 LYSMD1Q96S90 227 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 CIPCQ9C0C6 399 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 CLPBQ9H078 707 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 UTP6Q9NYH9 597 aaKnown RBP18.93■□□□□ 0.62
SMPD3-203ENST00000563226 PCDHB1Q9Y5F3 818 aa18.93■□□□□ 0.62
SMPD3-203ENST00000563226 UBDO15205 165 aa18.92■□□□□ 0.62
SMPD3-203ENST00000563226 FGF4P08620 206 aa18.92■□□□□ 0.62
SMPD3-203ENST00000563226 ZNF7P17097 686 aaPredicted RBP18.92■□□□□ 0.62
SMPD3-203ENST00000563226 ACRV1P26436 265 aa18.92■□□□□ 0.62
SMPD3-203ENST00000563226 PRDX3P30048 256 aaKnown RBP18.92■□□□□ 0.62
SMPD3-203ENST00000563226 SPAM1P38567 509 aa18.92■□□□□ 0.62
SMPD3-203ENST00000563226 ECT2LQ008S8 904 aa18.92■□□□□ 0.62
SMPD3-203ENST00000563226 GEN1Q17RS7 908 aa18.92■□□□□ 0.62
SMPD3-203ENST00000563226 CARD16Q5EG05 197 aa18.92■□□□□ 0.62
SMPD3-203ENST00000563226 KANK2Q63ZY3 851 aa18.92■□□□□ 0.62
SMPD3-203ENST00000563226 UGT3A1Q6NUS8 523 aa18.92■□□□□ 0.62
SMPD3-203ENST00000563226 DNAJC5GQ8N7S2 189 aa18.92■□□□□ 0.62
SMPD3-203ENST00000563226 TWIST2Q8WVJ9 160 aa18.92■□□□□ 0.62
SMPD3-203ENST00000563226 SORCS1Q8WY21 1168 aa18.92■□□□□ 0.62
SMPD3-203ENST00000563226 ASB2Q96Q27 587 aa18.92■□□□□ 0.62
SMPD3-203ENST00000563226 TUBB1Q9H4B7 451 aa18.92■□□□□ 0.62
SMPD3-203ENST00000563226 APPL1Q9UKG1 709 aa18.92■□□□□ 0.62
SMPD3-203ENST00000563226 PCTPQ9UKL6 214 aa18.92■□□□□ 0.62
SMPD3-203ENST00000563226 CXorf51AA0A1B0GTR3 108 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 PIP5K1BO14986 540 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 RPS3P23396 243 aaKnown RBP eCLIP18.91■□□□□ 0.62
SMPD3-203ENST00000563226 LCP2Q13094 533 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 CCDC6Q16204 474 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 ANKS6Q68DC2 871 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 TPRG1Q6ZUI0 275 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 GPSM1Q86YR5 675 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.91■□□□□ 0.62
SMPD3-203ENST00000563226 RBFAQ8N0V3 343 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 PCDH20Q8N6Y1 951 aaKnown RBP18.91■□□□□ 0.62
SMPD3-203ENST00000563226 KYQ8NBH2 561 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms