RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 CHST15Q7LFX5 561 aaPredicted RBP17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 TAS2R42Q7RTR8 314 aa17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 SNX20Q7Z614 316 aa17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 GALNT13Q8IUC8 556 aa17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 PIANPQ8IYJ0 282 aa17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 FSTL5Q8N475 847 aaPredicted RBP17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 RASGEF1AQ8N9B8 481 aa17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 GPBAR1Q8TDU6 330 aa17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 DOLKQ9UPQ8 538 aa17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 SNX24Q9Y343 169 aa17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 MRFAP1Q9Y605 127 aa17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 SLC30A1Q9Y6M5 507 aa17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 ZNF106Q9H2Y7 1883 aaKnown RBP17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 LY6G6EA0A0G2JKS1 128 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 EFCAB8A8MWE9 144 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 H7C0S8 307 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 GRID2O43424 1007 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 BANF1O75531 89 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 TUBB4AP04350 444 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 RPL21P46778 160 aaKnown RBP17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 SMAD1Q15797 465 aaKnown RBP17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 PROX2Q3B8N5 592 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 INAVAQ3KP66 663 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 PLA2G4EQ3MJ16 856 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 FNBP1LQ5T0N5 605 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 SLC30A9Q6PML9 568 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 DET1Q7L5Y6 550 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 ZNF547Q8IVP9 402 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 DDHD1Q8NEL9 900 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 KIF18AQ8NI77 898 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 MFSD3Q96ES6 412 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 APOLD1Q96LR9 279 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 OR2M4Q96R27 311 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 C19orf43Q9BQ61 176 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 SPATS2LQ9NUQ6 558 aaKnown RBP17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 SMOXQ9NWM0 555 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 TRNAU1APQ9NX07 287 aaKnown RBP17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 SIRPGQ9P1W8 387 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 FTSJ1Q9UET6 329 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 SLC23A2Q9UGH3 650 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 CRLS1Q9UJA2 301 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 U3KQA8 63 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 GOLGA4Q13439 2230 aaKnown RBP17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 AGAP14A8MT82 685 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 AP3B1O00203 1094 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 CHUKO15111 745 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 TP73O15350 636 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 GOT2P00505 430 aaKnown RBP17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 MLNP12872 115 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 ACP5P13686 325 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 ITGALP20701 1170 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 CTSCP53634 463 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 ITGA8P53708 1063 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 SIM1P81133 766 aaPredicted RBP17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 B4GALNT1Q00973 533 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 ACVR1Q04771 509 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 CKAP4Q07065 602 aaKnown RBP17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 LAMB3Q13751 1172 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 WHAMMP3Q1A5X7 153 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 MSS51Q4VC12 460 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 LDLRAP1Q5SW96 308 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 CASC4Q6P4E1 433 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 DGLUCYQ7Z3D6 616 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 SLCO6A1Q86UG4 719 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 GKN2Q86XP6 184 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 FAM46DQ8NEK8 389 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 OR6P1Q8NGX9 317 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 CDC6Q99741 560 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 KIFC1Q9BW19 673 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 BOCQ9BWV1 1114 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 DPH5Q9H2P9 285 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 TREX1Q9NSU2 369 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 TOR4AQ9NXH8 423 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 GPR34Q9UPC5 381 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 KCNK6Q9Y257 313 aa17.24■□□□□ 0.35
CCNDBP1-204ENST00000563065 SDR42E2A6NKP2 422 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 OR2AG2A6NM03 316 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 TPP1O14773 563 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 VEGFDO43915 354 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 ALPPL2P10696 532 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 MSH3P20585 1137 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 AKT1P31749 480 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 FOXN2P32314 431 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 MAGEA3P43357 314 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 CACNG1Q06432 222 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 ILF3Q12906 894 aaKnown RBP eCLIP17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 CCDC157Q569K6 752 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 HIBCHQ6NVY1 386 aaPredicted RBP17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 TMEM220Q6QAJ8 160 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 NLRP9Q7RTR0 991 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 PCGF5Q86SE9 256 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 SERPINA9Q86WD7 417 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 NXPE1Q8N323 547 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 BEND7Q8N7W2 519 aaPredicted RBP17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 SGF29Q96ES7 293 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 SIGLEC10Q96LC7 697 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 TTC25Q96NG3 672 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 DUSP23Q9BVJ7 150 aa17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 XAB2Q9HCS7 855 aaKnown RBP17.23■□□□□ 0.35
CCNDBP1-204ENST00000563065 TAAR2Q9P1P5 351 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms