RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 DNAJC16Q9Y2G8 782 aa12.82□□□□□ -0.36
SF3B3-202ENST00000562722 TMEM184BQ9Y519 407 aaPredicted RBP12.82□□□□□ -0.36
SF3B3-202ENST00000562722 RPS6KL1Q9Y6S9 549 aa12.82□□□□□ -0.36
SF3B3-202ENST00000562722 TLN1Q9Y490 2541 aaKnown RBP12.82□□□□□ -0.36
SF3B3-202ENST00000562722 ZFC3H1O60293 1989 aaKnown RBP12.81□□□□□ -0.36
SF3B3-202ENST00000562722 UBXN7O94888 489 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 DLGAP3O95886 979 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 ANKRD34CP0C6C1 535 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 PIRTP0C851 137 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 DLSTP36957 453 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 STAT5AP42229 794 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 TAS2R40P59535 323 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 UBE2IP63279 158 aaKnown RBP12.81□□□□□ -0.36
SF3B3-202ENST00000562722 ZBED6P86452 979 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 AP1B1Q10567 949 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 IGFBP7Q16270 282 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 PCSK7Q16549 785 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 LACTB2Q53H82 288 aaPredicted RBP12.81□□□□□ -0.36
SF3B3-202ENST00000562722 CAVIN1Q6NZI2 390 aaKnown RBP12.81□□□□□ -0.36
SF3B3-202ENST00000562722 RASGRP3Q8IV61 690 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 PQLC3Q8N755 202 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.81□□□□□ -0.36
SF3B3-202ENST00000562722 CTNNBL1Q8WYA6 563 aaPredicted RBP12.81□□□□□ -0.36
SF3B3-202ENST00000562722 HDAC11Q96DB2 347 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 STAMBPL1Q96FJ0 436 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 ABHD17AQ96GS6 310 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 ELMO2Q96JJ3 720 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 C9orf72Q96LT7 481 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 PLEKHG4BQ96PX9 1271 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 ZSCAN5AQ9BUG6 496 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 CEP41Q9BYV8 373 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 GPR63Q9BZJ6 419 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 SPRY4Q9C004 299 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 TRIM39Q9HCM9 518 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 RAD18Q9NS91 495 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 DTLQ9NZJ0 730 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 PCDHB3Q9Y5E6 796 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 HEY1Q9Y5J3 304 aa12.81□□□□□ -0.36
SF3B3-202ENST00000562722 MRPS18BQ9Y676 258 aaKnown RBP12.81□□□□□ -0.36
SF3B3-202ENST00000562722 MN1Q10571 1320 aaPredicted RBP12.81□□□□□ -0.36
SF3B3-202ENST00000562722 LRRD1A4D1F6 860 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 MTX2O75431 263 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 MMP2P08253 660 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 UBASH3AP57075 661 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 FANCCQ00597 558 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 SLC10A2Q12908 348 aaPredicted RBP12.8□□□□□ -0.36
SF3B3-202ENST00000562722 ZBTB17Q13105 803 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 C6orf15Q6UXA7 325 aaPredicted RBP12.8□□□□□ -0.36
SF3B3-202ENST00000562722 TMEM26Q6ZUK4 368 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 ADGRG6Q86SQ4 1221 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 LRRTM4Q86VH4 590 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 TRAM1L1Q8N609 369 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 GALNT6Q8NCL4 622 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 GPR26Q8NDV2 337 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 GLYATL1Q969I3 302 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 FAF2Q96CS3 445 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 AGAP3Q96P47 875 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 OR6C1Q96RD1 312 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 MAK16Q9BXY0 300 aaKnown RBP12.8□□□□□ -0.36
SF3B3-202ENST00000562722 UCK1Q9HA47 277 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 SIDT1Q9NXL6 827 aaKnown RBP12.8□□□□□ -0.36
SF3B3-202ENST00000562722 SCHIP1Q9P0W5 487 aaPredicted RBP12.8□□□□□ -0.36
SF3B3-202ENST00000562722 UVRAGQ9P2Y5 699 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 LNPEPQ9UIQ6 1025 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 LUC7L2Q9Y383 392 aaKnown RBP12.8□□□□□ -0.36
SF3B3-202ENST00000562722 ZNF711Q9Y462 761 aa12.8□□□□□ -0.36
SF3B3-202ENST00000562722 PRR19A6NJB7 356 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 GPR89AB7ZAQ6 455 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 KMOO15229 486 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 KATNA1O75449 491 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 H2AFZP0C0S5 128 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 GPR89BP0CG08 455 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 ZNF28P17035 718 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 ZNF7P17097 686 aaPredicted RBP12.79□□□□□ -0.36
SF3B3-202ENST00000562722 XRCC1P18887 633 aaPredicted RBP12.79□□□□□ -0.36
SF3B3-202ENST00000562722 KDELR1P24390 212 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 RPL10P27635 214 aaKnown RBP12.79□□□□□ -0.36
SF3B3-202ENST00000562722 LEPRP48357 1165 aaKnown RBP12.79□□□□□ -0.36
SF3B3-202ENST00000562722 CLCNKAP51800 687 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 DRG2P55039 364 aaKnown RBP12.79□□□□□ -0.36
SF3B3-202ENST00000562722 DCDC1P59894 354 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 SH3BP2P78314 561 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 IFI35P80217 286 aaPredicted RBP12.79□□□□□ -0.36
SF3B3-202ENST00000562722 FOXK1P85037 733 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 PPIDQ08752 370 aaKnown RBP12.79□□□□□ -0.36
SF3B3-202ENST00000562722 UBAP2LQ14157 1087 aaKnown RBP12.79□□□□□ -0.36
SF3B3-202ENST00000562722 MAP7Q14244 749 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 ERV3-1Q14264 604 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 IQCB1Q15051 598 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 ODF2Q5BJF6 829 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 FAM182AQ5T1J6 154 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 PDPK2PQ6A1A2 396 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 CCDC70Q6NSX1 233 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 IRGCQ6NXR0 463 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 H2AFVQ71UI9 128 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 NT5DC3Q86UY8 548 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 CNTD1Q8N815 330 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 GDAP1Q8TB36 358 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 RAPGEF5Q92565 580 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 CXorf40BQ96DE9 158 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms