RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 CCDC185Q8N715 623 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 SLC7A14Q8TBB6 771 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 URGCPQ8TCY9 931 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 PHF10Q8WUB8 498 aaKnown RBP13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 MFSD3Q96ES6 412 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 RBBP8Q99708 897 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 CPNE1Q99829 537 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 HPS4Q9NQG7 708 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 PAQR5Q9NXK6 330 aaPredicted RBP13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 A8MV72 311 aaPredicted RBP13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 PTGES3LE9PB15 166 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 UBDO15205 165 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 ENDOD1O94919 500 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 AKR1A1P14550 325 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 PGAM1P18669 254 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 HOXD10P28358 340 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 SPRP35270 261 aaPredicted RBP13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 SOX11P35716 441 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 PGGT1BP53609 377 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 GPLD1P80108 840 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 CAP1Q01518 475 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 ADIGQ0VDE8 80 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 SQLEQ14534 574 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 PPP1R3AQ16821 1122 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 KIAA0319Q5VV43 1072 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 GLRX5Q86SX6 157 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 SLC22A15Q8IZD6 547 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 FAM83FQ8NEG4 500 aaPredicted RBP13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 DYNC2LI1Q8TCX1 351 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 ARNTL2Q8WYA1 636 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 SDCCAG3Q96C92 435 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 SCYL1Q96KG9 808 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 SLC25A23Q9BV35 468 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 BTBD2Q9BX70 525 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 CASTOR2A6NHX0 329 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 TRPC5OSA6NMA1 111 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 MTRF1O75570 445 aaKnown RBP13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 PTTG1O95997 202 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 MPOP05164 745 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 FCGR1AP12314 374 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 RRM2P31350 389 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 ETV3P41162 512 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 POLD2P49005 469 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 GBE1Q04446 702 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 BNIP2Q12982 314 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 POU6F1Q14863 301 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 C8orf82Q6P1X6 216 aaPredicted RBP13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 UNC93AQ86WB7 457 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 B3GALNT2Q8NCR0 500 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 ACVR1CQ8NER5 493 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 CHAC2Q8WUX2 184 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 CERS2Q96G23 380 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 KCTD14Q9BQ13 255 aaPredicted RBP13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 INTS10Q9NVR2 710 aaKnown RBP13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 GTSE1Q9NYZ3 720 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 PDE10AQ9Y233 779 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 PCM1Q15154 2024 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 NDST3O95803 873 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 LDLRP01130 860 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 MTHFD1P11586 935 aaKnown RBP13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 SAT1P21673 171 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 GTF2E2P29084 291 aaKnown RBP13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 BCAT1P54687 386 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 TPD52P55327 224 aaPredicted RBP13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 NCS1P62166 190 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 MEP1AQ16819 746 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 ZNF181Q2M3W8 571 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 COLEC12Q5KU26 742 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 C3orf58Q8NDZ4 430 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 IL17RDQ8NFM7 739 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 SPPL2BQ8TCT7 592 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 HASPINQ8TF76 798 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 STON2Q8WXE9 905 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 TBCBQ99426 244 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 AGAP2Q99490 1192 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 KATNAL1Q9BW62 490 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 AGO3Q9H9G7 860 aaKnown RBP13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 C12orf10Q9HB07 376 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 UBA2Q9UBT2 640 aaPredicted RBP13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 MID2Q9UJV3 735 aa13.93□□□□□ -0.18
GTF3C1-203ENST00000562609 ZNF99A8MXY4 864 aaPredicted RBP13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 hCG_2039718K7EN88 272 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 POLR1CO15160 346 aaPredicted RBP13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 CHRNA1P02708 482 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 CAPN1P07384 714 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 SBK3P0C264 359 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 GFAPP14136 432 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 KCNE1P15382 129 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 POLR2CP19387 275 aaPredicted RBP13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 HADHAP40939 763 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 FLT3LGP49771 235 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 LIMK2P53671 638 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 FCHO2Q0JRZ9 810 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 LCN8Q6JVE9 175 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 C8orf59Q8N0T1 100 aaPredicted RBP13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 CRYBG2Q8N1P7 616 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 SVOPQ8N4V2 548 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 OR5H6Q8NGV6 325 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 GRPEL2Q8TAA5 225 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 HDAC2Q92769 488 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms