RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 UGT1A4P22310 534 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 ACRV1P26436 265 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 MC4RP32245 332 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 UGT1A3P35503 534 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 UGT1A5P35504 534 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 RPL21P46778 160 aaKnown RBP13.27□□□□□ -0.29
CDH1-204ENST00000562118 ARCN1P48444 511 aaKnown RBP13.27□□□□□ -0.29
CDH1-204ENST00000562118 SESN2P58004 480 aaPredicted RBP13.27□□□□□ -0.29
CDH1-204ENST00000562118 CACNG1Q06432 222 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 ELOCQ15369 112 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 PRRT3Q5FWE3 981 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 C6orf132Q5T0Z8 1188 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 IZUMO3Q5VZ72 239 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 XKR5Q6UX68 686 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 HID1Q8IV36 788 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 PIANPQ8IYJ0 282 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 MPP5Q8N3R9 675 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 SNF8Q96H20 258 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 LINC00615Q96LM1 132 aaPredicted RBP13.27□□□□□ -0.29
CDH1-204ENST00000562118 OR2M4Q96R27 311 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 WDR83Q9BRX9 315 aaKnown RBP13.27□□□□□ -0.29
CDH1-204ENST00000562118 PHACTR1Q9C0D0 580 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 TMEM168Q9H0V1 697 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 L2HGDHQ9H9P8 463 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 UGT1A7Q9HAW7 530 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 UGT1A10Q9HAW8 530 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 UGT1A8Q9HAW9 530 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 CYP4F12Q9HCS2 524 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 GRHL1Q9NZI5 618 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 WHRNQ9P202 907 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 GPR34Q9UPC5 381 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 TMEM98Q9Y2Y6 226 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 ZCWPW2A0A1B0GU75 182 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 MAGEB16A2A368 324 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 CCDC162PA2VCL2 907 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 SDR42E2A6NKP2 422 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 CCL22O00626 93 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 NDC80O14777 642 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 YY2O15391 372 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 ITGALP20701 1170 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 CRADDP78560 199 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 DMPKQ09013 629 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 TMEM115Q12893 351 aaPredicted RBP13.26□□□□□ -0.29
CDH1-204ENST00000562118 GOLGA4Q13439 2230 aaKnown RBP13.26□□□□□ -0.29
CDH1-204ENST00000562118 SEPT6Q14141 434 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 ITIH4Q14624 930 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 UAP1L1Q3KQV9 507 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 BCL7AQ4VC05 210 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 KIAA0930Q6ICG6 404 aaPredicted RBP13.26□□□□□ -0.29
CDH1-204ENST00000562118 PSAPL1Q6NUJ1 521 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 ZCCHC8Q6NZY4 707 aaKnown RBP13.26□□□□□ -0.29
CDH1-204ENST00000562118 AFTPHQ6ULP2 937 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 HEXDCQ8WVB3 486 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 CAMK1GQ96NX5 476 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 CDC6Q99741 560 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 TIMM29Q9BSF4 260 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 OR2AG1Q9H205 316 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 ASB8Q9H765 288 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 SUDS3Q9H7L9 328 aaPredicted RBP13.26□□□□□ -0.29
CDH1-204ENST00000562118 CARS2Q9HA77 564 aaKnown RBP13.26□□□□□ -0.29
CDH1-204ENST00000562118 PLAC1Q9HBJ0 212 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 GULP1Q9UBP9 304 aa13.26□□□□□ -0.29
CDH1-204ENST00000562118 DNMT3AQ9Y6K1 912 aaPredicted RBP13.26□□□□□ -0.29
CDH1-204ENST00000562118 EFCAB8A8MWE9 144 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 GRID2O43424 1007 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 SIGLEC6O43699 453 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 USP1O94782 785 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 KCNK5O95279 499 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 GOT2P00505 430 aaKnown RBP13.25□□□□□ -0.29
CDH1-204ENST00000562118 CKMT1AP12532 417 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 ACP1P24666 158 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 NMBRP28336 390 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 GNPDA1P46926 289 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 CDKN1CP49918 316 aaPredicted RBP13.25□□□□□ -0.29
CDH1-204ENST00000562118 ITGA8P53708 1063 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 TMPRSS15P98073 1019 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 CTBSQ01459 385 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 FRG1Q14331 258 aaKnown RBP13.25□□□□□ -0.29
CDH1-204ENST00000562118 MSS51Q4VC12 460 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 FNBP1LQ5T0N5 605 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 ZNF648Q5T619 568 aaPredicted RBP13.25□□□□□ -0.29
CDH1-204ENST00000562118 MICALCLQ6ZW33 695 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 GKN2Q86XP6 184 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 GALNT13Q8IUC8 556 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 RASGEF1AQ8N9B8 481 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 BBOF1Q8ND07 529 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 GPR156Q8NFN8 814 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 GPR150Q8NGU9 434 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 CCL4L1Q8NHW4 92 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 LMX1AQ8TE12 382 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 SCG3Q8WXD2 468 aaKnown RBP13.25□□□□□ -0.29
CDH1-204ENST00000562118 HDAC10Q969S8 669 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 LRRC39Q96DD0 335 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 MFSD3Q96ES6 412 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 CCDC97Q96F63 343 aaPredicted RBP13.25□□□□□ -0.29
CDH1-204ENST00000562118 ZNF514Q96K75 400 aaPredicted RBP13.25□□□□□ -0.29
CDH1-204ENST00000562118 GSDMCQ9BYG8 508 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 ZCCHC2Q9C0B9 1178 aaKnown RBP13.25□□□□□ -0.29
CDH1-204ENST00000562118 ZDHHC3Q9NYG2 299 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 TEX264Q9Y6I9 313 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms