RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	YME1L1	Q96TA2	773 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	RIOK1	Q9BRS2	568 aa	Known RBP	4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	FSD1	Q9BTV5	496 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	INTS2	Q9H0H0	1204 aa	Known RBP	4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	PRDM13	Q9H4Q3	707 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	AAMDC	Q9H7C9	122 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	DNAJC18	Q9H819	358 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	VPS37B	Q9H9H4	285 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	CCDC177	Q9NQR7	707 aa	Predicted RBP	4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	HAUS2	Q9NVX0	235 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	TMEM45A	Q9NWC5	275 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	TMEM248	Q9NWD8	314 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	AATF	Q9NY61	560 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	IL1RAPL1	Q9NZN1	696 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	CD207	Q9UJ71	328 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	UTS2R	Q9UKP6	389 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	COX11	Q9Y6N1	276 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	NAV1	Q8NEY1	1877 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	PTPRF	P10586	1907 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	CCL15-CCL14	A0A0B4J2E2	113 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	SMIM35	A0A1B0GVV1	85 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	OR6C68	A6NDL8	312 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	KCNJ18	B7U540	433 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431		F8W810	466 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	ASAP2	O43150	1006 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	PRPF4	O43172	522 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	TSC22D2	O75157	780 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	RTN2	O75298	545 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	PTP4A3	O75365	173 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	IDH1	O75874	414 aa	Known RBP	4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	NR2F1	P10589	423 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	PC	P11498	1178 aa	Known RBP	4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	POR	P16435	677 aa	Predicted RBP	4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	FER	P16591	822 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	CD72	P21854	359 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	TMOD1	P28289	359 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	CD38	P28907	300 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	EPHB2	P29323	1055 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	PBLD	P30039	288 aa	Predicted RBP	4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	MAGEA8	P43361	318 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	PSMC4	P43686	418 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	CASP6	P55212	293 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	ID2	Q02363	134 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	PPAT	Q06203	517 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	KLHL30	Q0D2K2	578 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	BFSP1	Q12934	665 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	ERV3-1	Q14264	604 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	CCL15	Q16663	113 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	FILIP1L	Q4L180	1135 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	EARS2	Q5JPH6	523 aa	Known RBP	4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	CCDC122	Q5T0U0	273 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	SLC18B1	Q6NT16	456 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	AADACL2	Q6P093	401 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	IYD	Q6PHW0	289 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	ANGPTL8	Q6UXH0	198 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	RRM2B	Q7LG56	351 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	ARMC8	Q8IUR7	673 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	SCYL3	Q8IZE3	742 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	DPP10	Q8N608	796 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	SPC24	Q8NBT2	197 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	MOSPD2	Q8NHP6	518 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	CTCFL	Q8NI51	663 aa	Predicted RBP	4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	GDAP1	Q8TB36	358 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZNF398	Q8TD17	642 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	BCAS4	Q8TDM0	211 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	CREB3L4	Q8TEY5	395 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	VPS39	Q96JC1	886 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	FAM81B	Q96LP2	452 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	RMDN2	Q96LZ7	410 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	CCDC114	Q96M63	670 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	TUBB6	Q9BUF5	446 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	QTRT1	Q9BXR0	403 aa	Known RBP	4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	LRRCC1	Q9C099	1032 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	SEMA4C	Q9C0C4	833 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	SLC32A1	Q9H598	525 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	DCTPP1	Q9H773	170 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	LIN28A	Q9H9Z2	209 aa	Known RBP	4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	IL21R	Q9HBE5	538 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZNF304	Q9HCX3	659 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	TXNRD2	Q9NNW7	524 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	PDE7B	Q9NP56	450 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	TRPV5	Q9NQA5	729 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	SLC22A11	Q9NSA0	550 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	EXOC1	Q9NV70	894 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	PAG1	Q9NWQ8	432 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	SEPT10	Q9P0V9	454 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	UPB1	Q9UBR1	384 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	LAMP3	Q9UQV4	416 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	CNPY2	Q9Y2B0	182 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	CAB39	Q9Y376	341 aa	Predicted RBP	4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	CYP46A1	Q9Y6A2	500 aa		4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.18	□□□□□ -1.74
LRRC28-222	ENST00000561431	CASP8AP2	Q9UKL3	1982 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	LACTBL1	A8MY62	500 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	AP3B1	O00203	1094 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	CACNB4	O00305	520 aa	Predicted RBP	4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	PER2	O15055	1255 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	TXNL1	O43396	289 aa		4.17	□□□□□ -1.74

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