RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 NFKBIBQ15653 356 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 FILIP1LQ4L180 1135 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 COLEC12Q5KU26 742 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 SNAP47Q5SQN1 464 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 MANEAQ5SRI9 462 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 ARMC12Q5T9G4 340 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 MARC1Q5VT66 337 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 NCBP2-AS2Q69YL0 99 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 TECPR1Q7Z6L1 1165 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 LUZP1Q86V48 1076 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 PIM3Q86V86 326 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 CBARPQ8N350 705 aaPredicted RBP7.19□□□□□ -1.26
GABPB1-211ENST00000561010 ZNF417Q8TAU3 575 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 NUDT8Q8WV74 236 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 ART4Q93070 314 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 SCARF2Q96GP6 870 aaPredicted RBP7.19□□□□□ -1.26
GABPB1-211ENST00000561010 ZNF599Q96NL3 588 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 ZNF587Q96SQ5 575 aaPredicted RBP7.19□□□□□ -1.26
GABPB1-211ENST00000561010 EIF3CQ99613 913 aaKnown RBP7.19□□□□□ -1.26
GABPB1-211ENST00000561010 RIOK2Q9BVS4 552 aaKnown RBP7.19□□□□□ -1.26
GABPB1-211ENST00000561010 PACSIN1Q9BY11 444 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 GSDMCQ9BYG8 508 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 CEP41Q9BYV8 373 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 NPHS2Q9NP85 383 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 OCIAD1Q9NX40 245 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 DONSONQ9NYP3 566 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 PHTF1Q9UMS5 762 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 PCDHGA7Q9Y5G6 932 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 B3GALT1Q9Y5Z6 326 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 SCINQ9Y6U3 715 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 DOCK10Q96BY6 2186 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 SHANK1Q9Y566 2161 aa7.19□□□□□ -1.26
GABPB1-211ENST00000561010 UBR5O95071 2799 aaPredicted RBP7.19□□□□□ -1.26
GABPB1-211ENST00000561010 IGHV1OR21-1A0A087WYE8 117 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 A0A1W2PQC6 194 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 FADS2P1A8MWK0 482 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 GOLGA6L22H0YM25 854 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 NUDT21O43809 227 aaKnown RBP7.18□□□□□ -1.26
GABPB1-211ENST00000561010 SMNDC1O75940 238 aaKnown RBP eCLIP7.18□□□□□ -1.26
GABPB1-211ENST00000561010 CLDN7O95471 211 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 ASMTLO95671 621 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 CPNE6O95741 557 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 SERPINC1P01008 464 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 PRLP01236 227 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 SLC4A1P02730 911 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 HLA-DQB2P05538 268 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 PIRTP0C851 137 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 LIPCP11150 499 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 CYP2A6P11509 494 aaPredicted RBP7.18□□□□□ -1.26
GABPB1-211ENST00000561010 PNLIPP16233 465 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 PCK1P35558 622 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 GARSP41250 739 aaKnown RBP7.18□□□□□ -1.26
GABPB1-211ENST00000561010 MAPK9P45984 424 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 ARSEP51690 589 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 FANCCQ00597 558 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 GBE1Q04446 702 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 SLC10A2Q12908 348 aaPredicted RBP7.18□□□□□ -1.26
GABPB1-211ENST00000561010 EIF3IQ13347 325 aaKnown RBP7.18□□□□□ -1.26
GABPB1-211ENST00000561010 NFATC2Q13469 925 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 BIRC2Q13490 618 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 DPYSL3Q14195 570 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 CLCA4Q14CN2 919 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 TBR1Q16650 682 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 PYCR3Q53H96 274 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 USP45Q70EL2 814 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 KDELC2Q7Z4H8 507 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 C17orf82Q86X59 251 aaPredicted RBP7.18□□□□□ -1.26
GABPB1-211ENST00000561010 PSTKQ8IV42 348 aaKnown RBP7.18□□□□□ -1.26
GABPB1-211ENST00000561010 GALNT12Q8IXK2 581 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 LZTR1Q8N653 840 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 LPCAT1Q8NF37 534 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 OR6C4Q8NGE1 309 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 KIAA1524Q8TCG1 905 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 SLC37A2Q8TED4 501 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 AP2M1Q96CW1 435 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 SGF29Q96ES7 293 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 SCRN2Q96FV2 425 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 WBP1Q96G27 269 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 OR2M4Q96R27 311 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 MCCC1Q96RQ3 725 aaPredicted RBP7.18□□□□□ -1.26
GABPB1-211ENST00000561010 WDR24Q96S15 920 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 CMKLR1Q99788 373 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 CTRCQ99895 268 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 BPIFA3Q9BQP9 254 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 FUCA2Q9BTY2 467 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 CBX8Q9HC52 389 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 MRPL47Q9HD33 250 aaKnown RBP7.18□□□□□ -1.26
GABPB1-211ENST00000561010 DTLQ9NZJ0 730 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 ZNHIT2Q9UHR6 403 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 KCNK6Q9Y257 313 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 SLC17A4Q9Y2C5 497 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 BSNQ9UPA5 3926 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 PCM1Q15154 2024 aa7.18□□□□□ -1.26
GABPB1-211ENST00000561010 SPTBN1Q01082 2364 aaKnown RBP7.18□□□□□ -1.26
GABPB1-211ENST00000561010 A0A0J9YYE9 177 aa7.17□□□□□ -1.26
GABPB1-211ENST00000561010 SYCE3A1L190 88 aa7.17□□□□□ -1.26
GABPB1-211ENST00000561010 EFCAB7A8K855 629 aa7.17□□□□□ -1.26
GABPB1-211ENST00000561010 SMTNL1A8MU46 457 aa7.17□□□□□ -1.26
GABPB1-211ENST00000561010 TMX2-CTNND1H3BSU7 103 aa7.17□□□□□ -1.26
GABPB1-211ENST00000561010 PDE2AO00408 941 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms