RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 CCDC97Q96F63 343 aaPredicted RBP11.94□□□□□ -0.5
USP8-212ENST00000560730 DNAJC1Q96KC8 554 aaKnown RBP11.94□□□□□ -0.5
USP8-212ENST00000560730 CNTNAP3BQ96NU0 1288 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 CNTNAP3Q9BZ76 1288 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 RMI1Q9H9A7 625 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 KCNK6Q9Y257 313 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 IGF2RP11717 2491 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 TRBV23OR9-2A0A075B6M9 112 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 C1QTNF9BB2RNN3 333 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 E7EVH7 732 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 SRP72O76094 671 aaKnown RBP11.94□□□□□ -0.5
USP8-212ENST00000560730 CDK14O94921 469 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 PRAMEF1O95521 474 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 ECEL1O95672 775 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 APRTP07741 180 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 C1QTNF9P0C862 333 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 CDK4P11802 303 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 JUPP14923 745 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 COILP38432 576 aaPredicted RBP11.94□□□□□ -0.5
USP8-212ENST00000560730 LMAN1P49257 510 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 CDKN1CP49918 316 aaPredicted RBP11.94□□□□□ -0.5
USP8-212ENST00000560730 TERF1P54274 439 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 CDH17Q12864 832 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 TMEM115Q12893 351 aaPredicted RBP11.94□□□□□ -0.5
USP8-212ENST00000560730 TARDBPQ13148 414 aaKnown RBP eCLIP11.94□□□□□ -0.5
USP8-212ENST00000560730 CAMK2BQ13554 666 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 HLTFQ14527 1009 aaKnown RBP eCLIP11.94□□□□□ -0.5
USP8-212ENST00000560730 CYP1B1Q16678 543 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 PLA2G4EQ3MJ16 856 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 C14orf28Q4W4Y0 310 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 GPRC6AQ5T6X5 926 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 PPP1R21Q6ZMI0 780 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 TMPRSS12Q86WS5 348 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 C17orf82Q86X59 251 aaPredicted RBP11.94□□□□□ -0.5
USP8-212ENST00000560730 GALNT15Q8N3T1 639 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 RASGEF1AQ8N9B8 481 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 DNAAF3Q8N9W5 541 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 MAPK15Q8TD08 544 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 ACTRT1Q8TDG2 376 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 CCDC3Q9BQI4 270 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 ABCG4Q9H172 646 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 FAM96AQ9H5X1 160 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 CASS4Q9NQ75 786 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 EVA1BQ9NVM1 165 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 TBC1D29Q9UFV1 150 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 RNF215Q9Y6U7 377 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 TCRBV7S3A2A0A539 114 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 MROH6A6NGR9 719 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 CES2O00748 559 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 VEGFDO43915 354 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 MT-CO3P00414 261 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 KRT14P02533 472 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 PRSS56P0CW18 603 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 ZNF7P17097 686 aaPredicted RBP11.93□□□□□ -0.5
USP8-212ENST00000560730 VPS41P49754 854 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 ARSDP51689 593 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 CTSCP53634 463 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 BASP1P80723 227 aaKnown RBP11.93□□□□□ -0.5
USP8-212ENST00000560730 PDE1BQ01064 536 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 NFATC2Q13469 925 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 ITGA9Q13797 1035 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 LRP8Q14114 963 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 CDCP2Q5VXM1 449 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 PAPD7Q5XG87 772 aaKnown RBP11.93□□□□□ -0.5
USP8-212ENST00000560730 LRRTM4Q86VH4 590 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 Q8N9G6 341 aaPredicted RBP11.93□□□□□ -0.5
USP8-212ENST00000560730 DDHD1Q8NEL9 900 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 NAT6Q93015 286 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 ASB8Q9H765 288 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 KLC4Q9NSK0 619 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 NLE1Q9NVX2 485 aaPredicted RBP11.93□□□□□ -0.5
USP8-212ENST00000560730 SMOXQ9NWM0 555 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 APPL1Q9UKG1 709 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 NEU2Q9Y3R4 380 aa11.93□□□□□ -0.5
USP8-212ENST00000560730 FRYQ5TBA9 3013 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 A0A1W2PQM1 296 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 AGAP14A8MT82 685 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 GPR89AB7ZAQ6 455 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 KMOO15229 486 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 SNX2O60749 519 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 GPR89BP0CG08 455 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 TCP1P17987 556 aaKnown RBP11.92□□□□□ -0.5
USP8-212ENST00000560730 PSMA3P25788 255 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 CCL7P80098 99 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 B4GALNT1Q00973 533 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 LDLRAP1Q5SW96 308 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 CCDC137Q6PK04 289 aaKnown RBP11.92□□□□□ -0.5
USP8-212ENST00000560730 UNQ6494/PRO21346Q6UXR6 183 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 C4orf22Q6V702 233 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 C11orf96Q7Z7L8 435 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 ARL14Q8N4G2 192 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 DCBLD1Q8N8Z6 715 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 STYXQ8WUJ0 223 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 CDKN2AIPNLQ96HQ2 116 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 CAPZA3Q96KX2 299 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 ZNF778Q96MU6 729 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 NAP1L3Q99457 506 aaPredicted RBP11.92□□□□□ -0.5
USP8-212ENST00000560730 PRDM8Q9NQV8 689 aa11.92□□□□□ -0.5
USP8-212ENST00000560730 EIF2B3Q9NR50 452 aaKnown RBP11.92□□□□□ -0.5
USP8-212ENST00000560730 LRIT1Q9P2V4 623 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms