RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 SMIM31A0A1B0GVY4 71 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 ATP6AP2A0A1C7CYW4 349 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 OR10H2O60403 315 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 SERPINB7O75635 380 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 ATP6AP2O75787 350 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 SERPINI2O75830 405 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 TRBC1P01850 177 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 HIST1H2ABP04908 130 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 PTPN2P17706 415 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 AMD1P17707 334 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 PAFAH1B3Q15102 231 aaKnown RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 ALG11Q2TAA5 492 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 ARL13AQ5H913 290 aaPredicted RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 GET4Q7L5D6 327 aaPredicted RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 HIST3H2AQ7L7L0 130 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 TMPRSS11BQ86T26 416 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 COLGALT2Q8IYK4 626 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 HIST1H2ACQ93077 130 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 RNFT2Q96EX2 444 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 DNAJC1Q96KC8 554 aaKnown RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 TBATAQ96M53 351 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 OSBPL10Q9BXB5 764 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 KLHL25Q9H0H3 589 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 BCAS3Q9H6U6 928 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 MIOSQ9NXC5 875 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 CRNNQ9UBG3 495 aaPredicted RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 PACSIN3Q9UKS6 424 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 FCF1Q9Y324 198 aaKnown RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 FAM159BA6NKW6 160 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 NTRK1P04629 796 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 ENO2P09104 434 aaPredicted RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 DDX6P26196 483 aaKnown RBP eCLIP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 MTX3Q5HYI7 312 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 ARMC4Q5T2S8 1044 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 SLC9A4Q6AI14 798 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 SLC51AQ86UW1 340 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 CACTIN-AS1Q8N1I8 211 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 BEND7Q8N7W2 519 aaPredicted RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 OR7D4Q8NG98 312 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 BRI3BPQ8WY22 251 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 DDX1Q92499 740 aaKnown RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 TEFMQ96QE5 360 aaKnown RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 DCUN1D5Q9BTE7 237 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 REXO4Q9GZR2 422 aaKnown RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 TFB2MQ9H5Q4 396 aaKnown RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 PNPLA8Q9NP80 782 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 CNTN6Q9UQ52 1028 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 SLC9A8Q9Y2E8 581 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 TCRBV7S3A2A0A539 114 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 GSTT1P30711 240 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 CLK3P49761 638 aaKnown RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 CDH13P55290 713 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 CSNK2BP67870 215 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 INCA1Q0VD86 236 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 NR1D2Q14995 579 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 CLEC6AQ6EIG7 209 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 SPESP1Q6UW49 350 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 BNIPLQ7Z465 357 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 ZCCHC7Q8N3Z6 543 aaKnown RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 NPLOC4Q8TAT6 608 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 CENPIQ92674 756 aaPredicted RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 RBM4BQ9BQ04 359 aaKnown RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 ADI1Q9BV57 179 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 FNDC11Q9BVV2 318 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 RBM4Q9BWF3 364 aaKnown RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 GPR88Q9GZN0 384 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 SAMHD1Q9Y3Z3 626 aaKnown RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 NR2E3Q9Y5X4 410 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 ONECUT3O60422 494 aaPredicted RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 HLA-DQB2P05538 268 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 IRF9Q00978 393 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 CRHR2Q13324 411 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 C16orf72Q14CZ0 275 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 RBM44Q6ZP01 1051 aaKnown RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 LDB1Q86U70 411 aaPredicted RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 C17orf64Q86WR6 236 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 CPNE8Q86YQ8 564 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 ZNF540Q8NDQ6 660 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 PIK3C3Q8NEB9 887 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 TEX47Q8TBZ9 253 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 LRRC15Q8TF66 581 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 SLC35F5Q8WV83 523 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 TCF25Q9BQ70 676 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 CCNB1IP1Q9NPC3 277 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 COLEC10Q9Y6Z7 277 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 ISM1B1AKI9 464 aa6.87□□□□□ -1.31
AP4E1-203ENST00000560508 H3BM21 787 aa6.87□□□□□ -1.31
AP4E1-203ENST00000560508 METTL18O95568 372 aa6.87□□□□□ -1.31
AP4E1-203ENST00000560508 ESR1P03372 595 aa6.87□□□□□ -1.31
AP4E1-203ENST00000560508 RPL5P46777 297 aaKnown RBP6.87□□□□□ -1.31
AP4E1-203ENST00000560508 CAP1Q01518 475 aa6.87□□□□□ -1.31
AP4E1-203ENST00000560508 ATP1A4Q13733 1029 aa6.87□□□□□ -1.31
AP4E1-203ENST00000560508 PRKD1Q15139 912 aaPredicted RBP6.87□□□□□ -1.31
AP4E1-203ENST00000560508 ZNF618Q5T7W0 954 aa6.87□□□□□ -1.31
AP4E1-203ENST00000560508 PRSS55Q6UWB4 352 aaPredicted RBP6.87□□□□□ -1.31
AP4E1-203ENST00000560508 AMIGO2Q86SJ2 522 aa6.87□□□□□ -1.31
AP4E1-203ENST00000560508 SPPL2CQ8IUH8 684 aa6.87□□□□□ -1.31
AP4E1-203ENST00000560508 OR2T12Q8NG77 320 aa6.87□□□□□ -1.31
AP4E1-203ENST00000560508 AZIN2Q96A70 460 aa6.87□□□□□ -1.31
AP4E1-203ENST00000560508 C12orf65Q9H3J6 166 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms