RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 PRSS51A0A1B0GVH4 220 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 E5RI56 91 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 IFRD1O00458 451 aaPredicted RBP9.62□□□□□ -0.87
RTF1-206ENST00000560447 MRASO14807 208 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 TRIM24O15164 1050 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 TSPAN3O60637 253 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 SNX2O60749 519 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 ECI2O75521 394 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 GJB3O75712 270 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 UPP2O95045 317 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 TSPAN12O95859 305 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 TRBC1P01850 177 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 S100BP04271 92 aaPredicted RBP9.62□□□□□ -0.87
RTF1-206ENST00000560447 PDHA1P08559 390 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 IRF1P10914 325 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 UQCRBP14927 111 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 HDCP19113 662 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 ITGALP20701 1170 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 EEF1DP29692 281 aaKnown RBP9.62□□□□□ -0.87
RTF1-206ENST00000560447 BCL2L1Q07817 233 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 BNIP2Q12982 314 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 ADGRE1Q14246 886 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 PFKFB4Q16877 469 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 TRIM60Q495X7 471 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 ZRANB3Q5FWF4 1079 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 XKR7Q5GH72 579 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 CTSL3PQ5NE16 218 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 TCHHL1Q5QJ38 904 aaPredicted RBP9.62□□□□□ -0.87
RTF1-206ENST00000560447 GRAMD4Q6IC98 578 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 CAPRIN2Q6IMN6 1127 aaKnown RBP9.62□□□□□ -0.87
RTF1-206ENST00000560447 PSAPL1Q6NUJ1 521 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 CYHR1Q6ZMK1 362 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 GK5Q6ZS86 529 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 C16orf59Q7L2K0 433 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 SNX20Q7Z614 316 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 DEFB128Q7Z7B8 93 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 GPSM1Q86YR5 675 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 PHYKPLQ8IUZ5 450 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 KBTBD2Q8IY47 623 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 RBFAQ8N0V3 343 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 RYBPQ8N488 228 aaPredicted RBP9.62□□□□□ -0.87
RTF1-206ENST00000560447 MINDY1Q8N5J2 469 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 EFHBQ8N7U6 833 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 FIBINQ8TAL6 211 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 HMGCLL1Q8TB92 370 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 ADAMTS19Q8TE59 1207 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 GDPD5Q8WTR4 605 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 PIH1D2Q8WWB5 315 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 ZUFSPQ96AP4 578 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 CCDC124Q96CT7 223 aaKnown RBP9.62□□□□□ -0.87
RTF1-206ENST00000560447 LRGUKQ96M69 825 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 NSMCE3Q96MG7 304 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 GCNAQ96QF7 691 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 PHOX2BQ99453 314 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 EFHD1Q9BUP0 239 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 GPR63Q9BZJ6 419 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 TRIM15Q9C019 465 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 UNKQ9C0B0 810 aaKnown RBP9.62□□□□□ -0.87
RTF1-206ENST00000560447 RNF208Q9H0X6 261 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 ATP13A3Q9H7F0 1226 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 AKTIPQ9H8T0 292 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 SDR39U1Q9NRG7 319 aaPredicted RBP9.62□□□□□ -0.87
RTF1-206ENST00000560447 ABCB8Q9NUT2 735 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 TMEM181Q9P2C4 612 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 ABCD2Q9UBJ2 740 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 CD300AQ9UGN4 299 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 ZMYM5Q9UJ78 669 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 GNPTGQ9UJJ9 305 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 PCTPQ9UKL6 214 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 RAB26Q9ULW5 256 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 PPIL1Q9Y3C6 166 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 PCDHGC4Q9Y5F7 938 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 CPQQ9Y646 472 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 C15orf38-AP3S2A0A0A6YYH1 394 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 TRAV19A0A0A6YYK7 116 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 CAPN8A6NHC0 703 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 AGAP14A8MT82 685 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 BTN3A1O00481 513 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 FBP2O00757 339 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 AP1G1O43747 822 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 TLL1O43897 1013 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 SNAP91O60641 907 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 CRCPO75575 148 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 ARHGEF15O94989 841 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 GLUD1P00367 558 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 LRG1P02750 347 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 CYBBP04839 570 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 CLTBP09497 229 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 PIRTP0C851 137 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 CBSLP0DN79 551 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 CTSAP10619 480 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 HSD17B1P14061 328 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 XRCC1P18887 633 aaPredicted RBP9.61□□□□□ -0.87
RTF1-206ENST00000560447 MSH3P20585 1137 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 DGKAP23743 735 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 MZF1P28698 734 aaPredicted RBP9.61□□□□□ -0.87
RTF1-206ENST00000560447 SERPINA4P29622 427 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 CBSP35520 551 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 CSKP41240 450 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 VEGFBP49765 207 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms