RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 APLFQ8IW19 511 aaPredicted RBP13.38□□□□□ -0.27
TRAF3-208ENST00000560371 MCEMP1Q8IX19 187 aa13.38□□□□□ -0.27
TRAF3-208ENST00000560371 DEPDC4Q8N2C3 294 aa13.38□□□□□ -0.27
TRAF3-208ENST00000560371 FZD8Q9H461 694 aa13.38□□□□□ -0.27
TRAF3-208ENST00000560371 COPS7AQ9UBW8 275 aa13.38□□□□□ -0.27
TRAF3-208ENST00000560371 SNX10Q9Y5X0 201 aa13.38□□□□□ -0.27
TRAF3-208ENST00000560371 IQCMA0A1B0GVH7 501 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 ENPP3O14638 875 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 TIE1P35590 1138 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 UBR7Q8N806 425 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 BRSK1Q8TDC3 778 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 DGCR6LQ9BY27 220 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 UNC93B1Q9H1C4 597 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 WWP2O00308 870 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 ECDO95905 644 aaPredicted RBP13.37□□□□□ -0.27
TRAF3-208ENST00000560371 CCNA2P20248 432 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 RHAGQ02094 409 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 FOXM1Q08050 763 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 WFIKKN2Q8TEU8 576 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 ACDQ96AP0 544 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 SLC9A7Q96T83 725 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 TRMT61BQ9BVS5 477 aaKnown RBP13.37□□□□□ -0.27
TRAF3-208ENST00000560371 NUAK2Q9H093 628 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 ATG10Q9H0Y0 220 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 SPATA2Q9UM82 520 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 NFAT5O94916 1531 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 IPO13O94829 963 aaKnown RBP13.37□□□□□ -0.27
TRAF3-208ENST00000560371 ZNF37AP17032 561 aaPredicted RBP13.37□□□□□ -0.27
TRAF3-208ENST00000560371 ZNF132P52740 706 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 SPESP1Q6UW49 350 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 PYROXD2Q8N2H3 581 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 RTL3Q8N8U3 475 aaKnown RBP13.37□□□□□ -0.27
TRAF3-208ENST00000560371 LRRN4CLQ8ND94 238 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 TSTD1Q8NFU3 115 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 XAGE5Q8WWM1 108 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 MIEF2Q96C03 454 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 GMPPBQ9Y5P6 360 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 OR1F1O43749 312 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 ATP6V1G2O95670 118 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 MAPK12P53778 367 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 MYBPC1Q00872 1141 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 KLHL12Q53G59 568 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 LRP10Q7Z4F1 713 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 NANOGNBQ7Z5D8 188 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 AMZ2Q86W34 360 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 APOLD1Q96LR9 279 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 TLR6Q9Y2C9 796 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 ATRNL1Q5VV63 1379 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 VIRMAQ69YN4 1812 aaKnown RBP13.37□□□□□ -0.27
TRAF3-208ENST00000560371 IRAK2O43187 625 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 TOP3BO95985 862 aaKnown RBP13.37□□□□□ -0.27
TRAF3-208ENST00000560371 COL6A2P12110 1019 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 PDGFRLQ15198 375 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 ZIK1Q3SY52 487 aaPredicted RBP13.37□□□□□ -0.27
TRAF3-208ENST00000560371 DDI2Q5TDH0 399 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 CLHC1Q8NHS4 586 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 KIFC1Q9BW19 673 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 ABI3Q9P2A4 366 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 ERGIC3Q9Y282 383 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 LRCH1Q9Y2L9 728 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 IGKV6D-41A0A0C4DH26 115 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 SERPINA6P08185 405 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 CBFBQ13951 182 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 POMZP3Q6PJE2 187 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 SERPINA9Q86WD7 417 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 FAM129CQ86XR2 697 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 SLC9A6Q92581 669 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 GGA2Q9UJY4 613 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 Q9Y3F1 56 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 STON1Q9Y6Q2 735 aa13.37□□□□□ -0.27
TRAF3-208ENST00000560371 GRIN2DO15399 1336 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 SLC25A3Q00325 362 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 RBBP4Q09028 425 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 LAPTM5Q13571 262 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 UBXN11Q5T124 520 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 TTC23Q5W5X9 447 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 HEATR4Q86WZ0 1026 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 SRMSQ9H3Y6 488 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 HEBP2Q9Y5Z4 205 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 NALCNQ8IZF0 1738 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 ABCC6O95255 1503 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 ZNF567Q8N184 647 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 DNASE1L2Q92874 299 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 CIDEBQ9UHD4 219 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 A0A087WXM4 84 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 LAMP2P13473 410 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 KIR3DL1P43629 444 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 TRAF3Q13114 568 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 UBAP2LQ14157 1087 aaKnown RBP13.36□□□□□ -0.27
TRAF3-208ENST00000560371 BPIFB6Q8NFQ5 453 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 AUTS2Q8WXX7 1259 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 ANKRD27Q96NW4 1050 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 PCBD2Q9H0N5 130 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 KCNN2Q9H2S1 579 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 TLR9Q9NR96 1032 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 OSER1Q9NX31 292 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 CACNG4Q9UBN1 327 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 CNOT6Q9ULM6 557 aaKnown RBP13.36□□□□□ -0.27
TRAF3-208ENST00000560371 CORO1CQ9ULV4 474 aaPredicted RBP13.36□□□□□ -0.27
TRAF3-208ENST00000560371 RABGGTBP53611 331 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms