RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 RASGRP3Q8IV61 690 aa9.05□□□□□ -0.96
HDDC3-204ENST00000559834 RBM12BQ8IXT5 1001 aaKnown RBP9.05□□□□□ -0.96
HDDC3-204ENST00000559834 CCDC13Q8IYE1 715 aa9.05□□□□□ -0.96
HDDC3-204ENST00000559834 TEX19Q8NA77 164 aa9.05□□□□□ -0.96
HDDC3-204ENST00000559834 HDAC11Q96DB2 347 aa9.05□□□□□ -0.96
HDDC3-204ENST00000559834 IQCDQ96DY2 449 aa9.05□□□□□ -0.96
HDDC3-204ENST00000559834 ZDHHC12Q96GR4 267 aa9.05□□□□□ -0.96
HDDC3-204ENST00000559834 NAP1L5Q96NT1 182 aaPredicted RBP9.05□□□□□ -0.96
HDDC3-204ENST00000559834 SRPK1Q96SB4 655 aaKnown RBP9.05□□□□□ -0.96
HDDC3-204ENST00000559834 TBC1D10AQ9BXI6 508 aa9.05□□□□□ -0.96
HDDC3-204ENST00000559834 XPO4Q9C0E2 1151 aaKnown RBP9.05□□□□□ -0.96
HDDC3-204ENST00000559834 OR2AG1Q9H205 316 aa9.05□□□□□ -0.96
HDDC3-204ENST00000559834 MAGEE1Q9HCI5 957 aa9.05□□□□□ -0.96
HDDC3-204ENST00000559834 TLN1Q9Y490 2541 aaKnown RBP9.05□□□□□ -0.96
HDDC3-204ENST00000559834 MN1Q10571 1320 aaPredicted RBP9.05□□□□□ -0.96
HDDC3-204ENST00000559834 A0A1W2PQJ5 194 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 PRR19A6NJB7 356 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 PDZK1P1A8MUH7 402 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 CHUKO15111 745 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 VEGFDO43915 354 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 KATNA1O75449 491 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 RASSF9O75901 435 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 MT-ND3P03897 115 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 ZNF7P17097 686 aaPredicted RBP9.04□□□□□ -0.96
HDDC3-204ENST00000559834 TYRP1P17643 537 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 VCLP18206 1134 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 IDSP22304 550 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 GJC1P36383 396 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 DLSTP36957 453 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 ANP32AP39687 249 aaKnown RBP9.04□□□□□ -0.96
HDDC3-204ENST00000559834 SLC19A1P41440 591 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 CD86P42081 329 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 UBE2IP63279 158 aaKnown RBP9.04□□□□□ -0.96
HDDC3-204ENST00000559834 TPM4P67936 248 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 INSCQ1MX18 579 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 ZNF569Q5MCW4 686 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 HGSNATQ68CP4 663 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 TCTN3Q6NUS6 607 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 ABRAXAS1Q6UWZ7 409 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 WASH2PQ6VEQ5 465 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 TMC3Q7Z5M5 1100 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 ADGRG6Q86SQ4 1221 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 LRRTM4Q86VH4 590 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 FAM26EQ8N5C1 309 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 TRAM1L1Q8N609 369 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 STAMBPL1Q96FJ0 436 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 TGM7Q96PF1 710 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 OR6C1Q96RD1 312 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 GPR63Q9BZJ6 419 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 ZNF768Q9H5H4 540 aaKnown RBP9.04□□□□□ -0.96
HDDC3-204ENST00000559834 WASH6PQ9NQA3 447 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 POT1Q9NUX5 634 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 SIDT1Q9NXL6 827 aaKnown RBP9.04□□□□□ -0.96
HDDC3-204ENST00000559834 CTTNBP2NLQ9P2B4 639 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 PADI1Q9ULC6 663 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 POLHQ9Y253 713 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 PCYT1BQ9Y5K3 369 aaPredicted RBP9.04□□□□□ -0.96
HDDC3-204ENST00000559834 KCNMB2Q9Y691 235 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 NAV2Q8IVL1 2488 aa9.04□□□□□ -0.96
HDDC3-204ENST00000559834 TENM4Q6N022 2769 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 ZFC3H1O60293 1989 aaKnown RBP9.03□□□□□ -0.96
HDDC3-204ENST00000559834 A0A087X0T9 212 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 PIPSLA2A3N6 862 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 KCNK1O00180 336 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 KCNJ13O60928 360 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 KIAA0754O94854 1291 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 PROSCO94903 275 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 CDK14O94921 469 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 NDUFA10O95299 355 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 MMP2P08253 660 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 H2AFZP0C0S5 128 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 FAM228BP0C875 321 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 GP1BBP13224 206 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 SEPHS1P49903 392 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 GFERP55789 205 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 DCDC1P59894 354 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 IFI35P80217 286 aaPredicted RBP9.03□□□□□ -0.96
HDDC3-204ENST00000559834 ZBED6P86452 979 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 GBE1Q04446 702 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 PPIDQ08752 370 aaKnown RBP9.03□□□□□ -0.96
HDDC3-204ENST00000559834 SLC10A2Q12908 348 aaPredicted RBP9.03□□□□□ -0.96
HDDC3-204ENST00000559834 ERV3-1Q14264 604 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.03□□□□□ -0.96
HDDC3-204ENST00000559834 CACHD1Q5VU97 1274 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 ALS2CLQ60I27 953 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 KLHL35Q6PF15 583 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 CRTC3Q6UUV7 619 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 H2AFVQ71UI9 128 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 NT5DC3Q86UY8 548 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 BPHLQ86WA6 291 aaPredicted RBP9.03□□□□□ -0.96
HDDC3-204ENST00000559834 PPP1R3BQ86XI6 285 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 PQLC3Q8N755 202 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 GALNT6Q8NCL4 622 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 GPR26Q8NDV2 337 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 BRSK1Q8TDC3 778 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.03□□□□□ -0.96
HDDC3-204ENST00000559834 CPLX3Q8WVH0 158 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 SEC14L1Q92503 715 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 GLYATL1Q969I3 302 aa9.03□□□□□ -0.96
HDDC3-204ENST00000559834 FAF2Q96CS3 445 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms