RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 TRPV4Q9HBA0 871 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 PCDHB16Q9NRJ7 776 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 GIMAP4Q9NUV9 329 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 MRPL15Q9P015 296 aaKnown RBP3.69□□□□□ -1.82
SPG11-218ENST00000559754 KIAA1456Q9P272 454 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 SUCLA2Q9P2R7 463 aaPredicted RBP3.69□□□□□ -1.82
SPG11-218ENST00000559754 PEMTQ9UBM1 199 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 POU2F3Q9UKI9 436 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 CCL27Q9Y4X3 112 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 FRMD3A2A2Y4 597 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 SOCS6O14544 535 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 MID1O15344 667 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 SLC7A4O43246 635 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 PLRG1O43660 514 aaKnown RBP3.68□□□□□ -1.82
SPG11-218ENST00000559754 FGF17O60258 216 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 KLK8O60259 260 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 ENTPD3O75355 529 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 TGDSO95455 350 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 URODP06132 367 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 RARGP13631 454 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 ETFAP13804 333 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 DDX5P17844 614 aaKnown RBP3.68□□□□□ -1.82
SPG11-218ENST00000559754 SAT1P21673 171 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 POU1F1P28069 291 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 KRT2P35908 639 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 ATP6V1E1P36543 226 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 HSD17B4P51659 736 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 PPP5CP53041 499 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 CLDN2P57739 230 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 NEXNQ0ZGT2 675 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 RBM39Q14498 530 aaKnown RBP3.68□□□□□ -1.82
SPG11-218ENST00000559754 RBBP5Q15291 538 aaKnown RBP3.68□□□□□ -1.82
SPG11-218ENST00000559754 MED22Q15528 200 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 NTRK2Q16620 822 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 IRAK1BP1Q5VVH5 260 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 CDC73Q6P1J9 531 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 RRM2BQ7LG56 351 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 DNAJB7Q7Z6W7 309 aaPredicted RBP3.68□□□□□ -1.82
SPG11-218ENST00000559754 THNSL1Q8IYQ7 743 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 DSELQ8IZU8 1212 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 TDRD5Q8NAT2 981 aaKnown RBP3.68□□□□□ -1.82
SPG11-218ENST00000559754 BEST2Q8NFU1 509 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 GSDMBQ8TAX9 411 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 FAM149B1Q96BN6 582 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 PERPQ96FX8 193 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 CCDC34Q96HJ3 373 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 MAP7D2Q96T17 732 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 GPATCH1Q9BRR8 931 aaKnown RBP3.68□□□□□ -1.82
SPG11-218ENST00000559754 HGH1Q9BTY7 390 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 NUF2Q9BZD4 464 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 PCDH9Q9HC56 1237 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 SNTG1Q9NSN8 517 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 MCM9Q9NXL9 1143 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 TAB2Q9NYJ8 693 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 KNSTRNQ9Y448 316 aa3.68□□□□□ -1.82
SPG11-218ENST00000559754 A0A1W2PS18 150 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 C19orf81C9J6K1 198 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 C16orf97H3BN30 126 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 P2RY10O00398 339 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 OR2C1O95371 312 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 CGAP01215 116 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 MMP2P08253 660 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 STMN1P16949 149 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 CPOXP36551 454 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 CTCFP49711 727 aaPredicted RBP3.67□□□□□ -1.82
SPG11-218ENST00000559754 SEC61BP60468 96 aaKnown RBP3.67□□□□□ -1.82
SPG11-218ENST00000559754 OLR1P78380 273 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 GOLGA8DPQ0D2H9 430 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 TMEM115Q12893 351 aaPredicted RBP3.67□□□□□ -1.82
SPG11-218ENST00000559754 DMP1Q13316 513 aaPredicted RBP3.67□□□□□ -1.82
SPG11-218ENST00000559754 IRF3Q14653 427 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 ADIPOQQ15848 244 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 KRT24Q2M2I5 525 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 TCTN1Q2MV58 587 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 SLC9B1Q4ZJI4 515 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 CEP85LQ5SZL2 805 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 ERMARDQ5T6L9 678 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 ADAM5Q6NVV9 412 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 TTI2Q6NXR4 508 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 WDR73Q6P4I2 378 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 CPLX2Q6PUV4 134 aaKnown RBP3.67□□□□□ -1.82
SPG11-218ENST00000559754 B3GNT6Q6ZMB0 384 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 DENND5BQ6ZUT9 1274 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 RAPH1Q70E73 1250 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 CHST9Q7L1S5 443 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 CCDC186Q7Z3E2 898 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 CCDC91Q7Z6B0 441 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 CEP97Q8IW35 865 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 UNC45BQ8IWX7 931 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 METTL27Q8N6F8 245 aaPredicted RBP3.67□□□□□ -1.82
SPG11-218ENST00000559754 POGLUT1Q8NBL1 392 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 GDAP1Q8TB36 358 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 PRPF31Q8WWY3 499 aaKnown RBP3.67□□□□□ -1.82
SPG11-218ENST00000559754 SNX21Q969T3 373 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 SLC22A18Q96BI1 424 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 KLHL29Q96CT2 875 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 PGAP3Q96FM1 320 aaPredicted RBP3.67□□□□□ -1.82
SPG11-218ENST00000559754 WBP1Q96G27 269 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 DUX3Q96PT4 197 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 APOL6Q9BWW8 343 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms