RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 RAVER1Q8IY67 606 aaKnown RBP12.57□□□□□ -0.4
USP3-213ENST00000559711 EEF1AKMT1Q8WVE0 214 aa12.57□□□□□ -0.4
USP3-213ENST00000559711 STON2Q8WXE9 905 aa12.57□□□□□ -0.4
USP3-213ENST00000559711 OR8D1Q8WZ84 308 aa12.57□□□□□ -0.4
USP3-213ENST00000559711 INPP5DQ92835 1189 aa12.57□□□□□ -0.4
USP3-213ENST00000559711 TMEM237Q96Q45 408 aa12.57□□□□□ -0.4
USP3-213ENST00000559711 FAM129BQ96TA1 746 aa12.57□□□□□ -0.4
USP3-213ENST00000559711 EBF4Q9BQW3 602 aa12.57□□□□□ -0.4
USP3-213ENST00000559711 TRMT61BQ9BVS5 477 aaKnown RBP12.57□□□□□ -0.4
USP3-213ENST00000559711 LATS2Q9NRM7 1088 aa12.57□□□□□ -0.4
USP3-213ENST00000559711 SMOXQ9NWM0 555 aa12.57□□□□□ -0.4
USP3-213ENST00000559711 THAP10Q9P2Z0 257 aaPredicted RBP12.57□□□□□ -0.4
USP3-213ENST00000559711 HCN2Q9UL51 889 aa12.57□□□□□ -0.4
USP3-213ENST00000559711 PRSS21Q9Y6M0 314 aa12.57□□□□□ -0.4
USP3-213ENST00000559711 SLCO1B7G3V0H7 640 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 MYO1CO00159 1063 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 MATN2O00339 956 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 DNAJC8O75937 253 aaPredicted RBP12.56□□□□□ -0.4
USP3-213ENST00000559711 UNC5CO95185 931 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 KAT7O95251 611 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 T-ENOLP0DO92 83 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 HLA-EP13747 358 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 XPAP23025 273 aaPredicted RBP12.56□□□□□ -0.4
USP3-213ENST00000559711 MPSTP25325 297 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 ITGB7P26010 798 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 MMP12P39900 470 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 CCR10P46092 362 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 IDH3AP50213 366 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 NCALDP61601 193 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 TUBB3Q13509 450 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 ITPRIPL2Q3MIP1 535 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 CFAP157Q5JU67 520 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 ZNF678Q5SXM1 525 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 EPGNQ6UW88 154 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 PARS2Q7L3T8 475 aaKnown RBP12.56□□□□□ -0.4
USP3-213ENST00000559711 TECPR1Q7Z6L1 1165 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 ALYREFQ86V81 257 aaKnown RBP12.56□□□□□ -0.4
USP3-213ENST00000559711 PHF21BQ96EK2 531 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 COPS8Q99627 209 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 TRMOQ9BU70 441 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 TUBB6Q9BUF5 446 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 RPP25Q9BUL9 199 aaKnown RBP12.56□□□□□ -0.4
USP3-213ENST00000559711 PRO3102Q9H379 93 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 FAM83DQ9H4H8 585 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 CYP4F12Q9HCS2 524 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 ACSS2Q9NR19 701 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 CLDND1Q9NY35 253 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 KLHL42Q9P2K6 505 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 ZDHHC2Q9UIJ5 367 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 IKZF3Q9UKT9 509 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 TMPRSS11EQ9UL52 423 aa12.56□□□□□ -0.4
USP3-213ENST00000559711 SYCE1LA8MT33 242 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 CDC7O00311 574 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 KPNA3O00505 521 aaPredicted RBP12.55□□□□□ -0.4
USP3-213ENST00000559711 FCHO1O14526 889 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 HDAC3O15379 428 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 KLK8O60259 260 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 CCDC22O60826 627 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 LIG3P49916 1009 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 HERVK_113P63132 956 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 KRT72Q14CN4 511 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 TSNQ15631 228 aaKnown RBP12.55□□□□□ -0.4
USP3-213ENST00000559711 ERAP2Q6P179 960 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 SERPINA13PQ6UXR4 307 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 LIPIQ6XZB0 460 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 FRMD7Q6ZUT3 714 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 MTSS1LQ765P7 747 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 CPNE9Q8IYJ1 553 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 CLDN19Q8N6F1 224 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 PIP4K2CQ8TBX8 421 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 FUBP1Q96AE4 644 aaKnown RBP12.55□□□□□ -0.4
USP3-213ENST00000559711 LINGO1Q96FE5 620 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 ERVK-6Q9BXR3 956 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 NMUR2Q9GZQ4 415 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 GSTO2Q9H4Y5 243 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 COG4Q9H9E3 785 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 SARS2Q9NP81 518 aaKnown RBP12.55□□□□□ -0.4
USP3-213ENST00000559711 TXLNGQ9NUQ3 528 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 EPS15L1Q9UBC2 864 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 VTI1BQ9UEU0 232 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 SUN2Q9UH99 717 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 RNF112Q9ULX5 631 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 APOBEC2Q9Y235 224 aaKnown RBP12.55□□□□□ -0.4
USP3-213ENST00000559711 MTCH2Q9Y6C9 303 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 REV3LO60673 3130 aa12.55□□□□□ -0.4
USP3-213ENST00000559711 KIF26AQ9ULI4 1882 aaPredicted RBP12.55□□□□□ -0.4
USP3-213ENST00000559711 H0Y858 1186 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 UBXN8O00124 270 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 PSMD11O00231 422 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 GRID2O43424 1007 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 SLC25A14O95258 325 aaPredicted RBP12.54□□□□□ -0.4
USP3-213ENST00000559711 SERPINA6P08185 405 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 HNRNPLP14866 589 aaKnown RBP eCLIP12.54□□□□□ -0.45e-18■■■■□ 21.7
USP3-213ENST00000559711 POU3F3P20264 500 aaPredicted RBP12.54□□□□□ -0.4
USP3-213ENST00000559711 IL12RB1P42701 662 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 B4GALNT1Q00973 533 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 ENPP2Q13822 863 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 CRY1Q16526 586 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 UNC50Q53HI1 259 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 GPRC6AQ5T6X5 926 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms