RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 NEK3P51956 506 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 PKNOX1P55347 436 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 ARCQ7LC44 396 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 SERPINA9Q86WD7 417 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 PHYKPLQ8IUZ5 450 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 HID1Q8IV36 788 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 POMKQ9H5K3 350 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 SNX15Q9NRS6 342 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 SPACA6W5XKT8 324 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 MCM3APO60318 1980 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 MGAT4DA6NG13 374 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 PRR5-ARHGAP8B1AHC4 643 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 ATG13O75143 517 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 GOT2P00505 430 aaKnown RBP10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 IFNA8P32881 189 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 ARHGAP8P85298 464 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 MPP1Q00013 466 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 CACNG1Q06432 222 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 EOGTQ5NDL2 527 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 EMC10Q5UCC4 262 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 CACHD1Q5VU97 1274 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 OR56A4Q8NGH8 313 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 PTCD2Q8WV60 388 aaKnown RBP10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 HEXDCQ8WVB3 486 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 FAR2Q96K12 515 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 CSNK1G1Q9HCP0 422 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 RGPD3A6NKT7 1758 aaPredicted RBP10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 RGPD4Q7Z3J3 1758 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 DOCK3Q8IZD9 2030 aa10.59□□□□□ -0.71
CARMIL3-202ENST00000559694 H3BM21 787 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 ZW10O43264 779 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 TBX10O75333 385 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 PBX2P40425 430 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 WDR4P57081 412 aaKnown RBP10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 OLIG2Q13516 323 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 SMYD5Q6GMV2 418 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 CHST15Q7LFX5 561 aaPredicted RBP10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 SNX32Q86XE0 403 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 CFAP206Q8IYR0 622 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 BEND7Q8N7W2 519 aaPredicted RBP10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 OR10G6Q8NH81 332 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 FERD3LQ96RJ6 166 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 RNF38Q9H0F5 515 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 DPEP2Q9H4A9 486 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 BLOC1S6Q9UL45 172 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 CA14Q9ULX7 337 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 FER1L6Q2WGJ9 1857 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 ANKRD66B4E2M5 251 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 WNT9AO14904 365 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 ALBP02768 609 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 TSPAN8P19075 237 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 ME2P23368 584 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 ARHGDIAP52565 204 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 NR1H2P55055 460 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 KCNK10P57789 538 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 LRRC74AQ0VAA2 488 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 ILF3Q12906 894 aaKnown RBP eCLIP10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 ZNF776Q68DI1 518 aaPredicted RBP10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 ZFP1Q6P2D0 407 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 KYAT3Q6YP21 454 aaKnown RBP10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 LYSMD3Q7Z3D4 306 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 DENND6AQ8IWF6 608 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 UMODL1-AS1Q8N2C9 162 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 MECRQ9BV79 373 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 ACE2Q9BYF1 805 aaPredicted RBP10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 BTBD1Q9H0C5 482 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 ZBP1Q9H171 429 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 TAS2R1Q9NYW7 299 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 PIAS3Q9Y6X2 628 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 GREB1LQ9C091 1923 aaPredicted RBP10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 C15orf38-AP3S2A0A0A6YYH1 394 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 TCRBV7S3A2A0A539 114 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 SAC3D1A6NKF1 404 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 SLC2A4P14672 509 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 IDSP22304 550 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 TRMT10BQ6PF06 316 aaKnown RBP10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 BRAT1Q6PJG6 821 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 TMEM220Q6QAJ8 160 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 DPY19L3Q6ZPD9 716 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 RINLQ6ZS11 566 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 ARPINQ7Z6K5 226 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 TAF8Q7Z7C8 310 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 ADAMTSL2Q86TH1 951 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 GALNT13Q8IUC8 556 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 SLC43A3Q8NBI5 491 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 ITFG1Q8TB96 612 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 NAT14Q8WUY8 206 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 DACH2Q96NX9 599 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 SEMA6AQ9H2E6 1030 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 GDE1Q9NZC3 331 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 LRRC42Q9Y546 428 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 AK5Q9Y6K8 562 aa10.58□□□□□ -0.72
CARMIL3-202ENST00000559694 OR51F1A6NGY5 319 aa10.57□□□□□ -0.72
CARMIL3-202ENST00000559694 FPGTO14772 594 aa10.57□□□□□ -0.72
CARMIL3-202ENST00000559694 KLF8O95600 359 aaPredicted RBP10.57□□□□□ -0.72
CARMIL3-202ENST00000559694 EIF2S1P05198 315 aaKnown RBP10.57□□□□□ -0.72
CARMIL3-202ENST00000559694 SOAT1P35610 550 aa10.57□□□□□ -0.72
CARMIL3-202ENST00000559694 AAGABQ6PD74 315 aa10.57□□□□□ -0.72
CARMIL3-202ENST00000559694 CROCCP3Q8IVE0 287 aa10.57□□□□□ -0.72
CARMIL3-202ENST00000559694 TSPAN14Q8NG11 270 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms