RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 CHRNA4P43681 627 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 FASLGP48023 281 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 LSSP48449 732 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 INHBCP55103 352 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 GDF10P55107 478 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 ERVPABLB-1P60509 514 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 GABREP78334 506 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 GPLD1P80108 840 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 SARNPP82979 210 aaKnown RBP4.32□□□□□ -1.72
SNX1-205ENST00000559339 CCZ1BP86790 482 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 CCZ1P86791 482 aaPredicted RBP4.32□□□□□ -1.72
SNX1-205ENST00000559339 HHEXQ03014 270 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 CYP4F3Q08477 520 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 CDH17Q12864 832 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 TMEM115Q12893 351 aaPredicted RBP4.32□□□□□ -1.72
SNX1-205ENST00000559339 NFATC2Q13469 925 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 SNX1Q13596 522 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 HLTFQ14527 1009 aaKnown RBP eCLIP4.32□□□□□ -1.72
SNX1-205ENST00000559339 RTP5Q14D33 572 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 CLPPQ16740 277 aaPredicted RBP4.32□□□□□ -1.72
SNX1-205ENST00000559339 SKIDA1Q1XH10 827 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 ISXQ2M1V0 245 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 AMZ1Q400G9 498 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 ATP13A5Q4VNC0 1218 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 PERM1Q5SV97 790 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 FAM182AQ5T1J6 154 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 TMEM164Q5U3C3 297 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 CDCP2Q5VXM1 449 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 KCTD16Q68DU8 428 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 ZNF449Q6P9G9 518 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 DRICH1Q6PGQ1 229 aaPredicted RBP4.32□□□□□ -1.72
SNX1-205ENST00000559339 IYDQ6PHW0 289 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 CRTC3Q6UUV7 619 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 PPP1R21Q6ZMI0 780 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 LRRC69Q6ZNQ3 347 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 NLRP9Q7RTR0 991 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 SPRED1Q7Z699 444 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 ADGRG6Q86SQ4 1221 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 AMZ2Q86W34 360 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 PROSER1Q86XN7 944 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 NRROSQ86YC3 692 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 TRIM48Q8IWZ4 208 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 NAGSQ8N159 534 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 SFRP1Q8N474 314 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 BEND7Q8N7W2 519 aaPredicted RBP4.32□□□□□ -1.72
SNX1-205ENST00000559339 Q8N9G6 341 aaPredicted RBP4.32□□□□□ -1.72
SNX1-205ENST00000559339 DDHD1Q8NEL9 900 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 OR4K2Q8NGD2 314 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 OR10G6Q8NH81 332 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 WDR36Q8NI36 951 aaKnown RBP4.32□□□□□ -1.72
SNX1-205ENST00000559339 SLC35B2Q8TB61 432 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 MDM1Q8TC05 714 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 ZNF398Q8TD17 642 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 C1orf54Q8WWF1 131 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 ATG4AQ8WYN0 398 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 FGF11Q92914 225 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.32□□□□□ -1.72
SNX1-205ENST00000559339 ULK4Q96C45 1275 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 RTP4Q96DX8 246 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 CCDC97Q96F63 343 aaPredicted RBP4.32□□□□□ -1.72
SNX1-205ENST00000559339 DCUN1D1Q96GG9 259 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 ZNF514Q96K75 400 aaPredicted RBP4.32□□□□□ -1.72
SNX1-205ENST00000559339 ZNF578Q96N58 590 aaPredicted RBP4.32□□□□□ -1.72
SNX1-205ENST00000559339 WDR24Q96S15 920 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 SLC38A3Q99624 504 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 DPYSL5Q9BPU6 564 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 APOL2Q9BQE5 337 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 TIMM29Q9BSF4 260 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 LRRN3Q9H3W5 708 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 ASB8Q9H765 288 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 CAAP1Q9H8G2 361 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 VPS37BQ9H9H4 285 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 POLR1BQ9H9Y6 1135 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 ARNT2Q9HBZ2 717 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 EPB41L5Q9HCM4 733 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 RAB6BQ9NRW1 208 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 THSD1Q9NS62 852 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 KLC4Q9NSK0 619 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 SMOXQ9NWM0 555 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 KCNK4Q9NYG8 393 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 IL17CQ9P0M4 197 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 PAK5Q9P286 719 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 CRLS1Q9UJA2 301 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 CNOT6Q9ULM6 557 aaKnown RBP4.32□□□□□ -1.72
SNX1-205ENST00000559339 KCNK6Q9Y257 313 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 R3HDM2Q9Y2K5 976 aaKnown RBP4.32□□□□□ -1.72
SNX1-205ENST00000559339 PRKAB1Q9Y478 270 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 PCDHGA8Q9Y5G5 932 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 SPO11Q9Y5K1 396 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 ARL5AQ9Y689 179 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 DNMT3AQ9Y6K1 912 aaPredicted RBP4.32□□□□□ -1.72
SNX1-205ENST00000559339 SLC30A1Q9Y6M5 507 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 RNF215Q9Y6U7 377 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 FREM2Q5SZK8 3169 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 DOCK9Q9BZ29 2069 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 TRBV23OR9-2A0A075B6M9 112 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 CCDC187A0A096LP49 1063 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 A0A1W2PQM1 296 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 HEATR9A2RTY3 570 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 OR2AG2A6NM03 316 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms