RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 PRAMEF1O95521 474 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 IDO1P14902 403 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 CLCN7P51798 805 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 PKNOX1P55347 436 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 LRP8Q14114 963 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 RPS6KA2Q15349 733 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 REP15Q6BDI9 236 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 IZUMO2Q6UXV1 221 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 FRA10AC1Q70Z53 315 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 APLFQ8IW19 511 aaPredicted RBP11.18□□□□□ -0.62
CLPX-204ENST00000559152 HIPK4Q8NE63 616 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 TTC16Q8NEE8 873 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 TSPEARQ8WU66 669 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 BHMTQ93088 406 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 TUBGCP3Q96CW5 907 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 ASB9Q96DX5 294 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 LYSMD1Q96S90 227 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 HGH1Q9BTY7 390 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 VCXQ9H320 206 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 ASB8Q9H765 288 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 TMEM45AQ9NWC5 275 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 ZDHHC7Q9NXF8 308 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 ADA2Q9NZK5 511 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 SUCOQ9UBS9 1254 aaKnown RBP11.18□□□□□ -0.62
CLPX-204ENST00000559152 NDUFAF1Q9Y375 327 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 PLXNA4Q9HCM2 1894 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 ANAPC1Q9H1A4 1944 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 ATP6AP2A0A1C7CYW4 349 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 A0A1W2PRU2 124 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 MRASO14807 208 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 CASQ2O14958 399 aaPredicted RBP11.17□□□□□ -0.62
CLPX-204ENST00000559152 SMAD6O43541 496 aaKnown RBP11.17□□□□□ -0.62
CLPX-204ENST00000559152 ATP6AP2O75787 350 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 SORBS2O94875 1100 aaKnown RBP11.17□□□□□ -0.62
CLPX-204ENST00000559152 MATN4O95460 622 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 STAMBPO95630 424 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 ALPIP09923 528 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 DGKAP23743 735 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 GJA8P48165 433 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 MRPL19P49406 292 aaKnown RBP11.17□□□□□ -0.62
CLPX-204ENST00000559152 TRAP1Q12931 704 aaKnown RBP11.17□□□□□ -0.62
CLPX-204ENST00000559152 NFATC2Q13469 925 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 CEACAM7Q14002 265 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 COQ5Q5HYK3 327 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 ZDHHC20Q5W0Z9 365 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 ANO7Q6IWH7 933 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 OGFOD2Q6N063 350 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 PRMT9Q6P2P2 845 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 CYHR1Q6ZMK1 362 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 TPGS1Q6ZTW0 290 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 SERPINA9Q86WD7 417 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 CPNE9Q8IYJ1 553 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 HS6ST3Q8IZP7 471 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 EFCAB3Q8N7B9 438 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 CATSPER1Q8NEC5 780 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 SHKBP1Q8TBC3 707 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 NR1H4Q96RI1 486 aaPredicted RBP11.17□□□□□ -0.62
CLPX-204ENST00000559152 MYCBPQ99417 103 aaPredicted RBP11.17□□□□□ -0.62
CLPX-204ENST00000559152 HOPXQ9BPY8 73 aaPredicted RBP11.17□□□□□ -0.62
CLPX-204ENST00000559152 CEP44Q9C0F1 390 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 SARS2Q9NP81 518 aaKnown RBP11.17□□□□□ -0.62
CLPX-204ENST00000559152 SEMA4BQ9NPR2 832 aaPredicted RBP11.17□□□□□ -0.62
CLPX-204ENST00000559152 RIC8BQ9NVN3 520 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 GALPQ9UBC7 116 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 CROTQ9UKG9 612 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 PCTPQ9UKL6 214 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 PCDHGA7Q9Y5G6 932 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 IRAK3Q9Y616 596 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 GLYATL1P3A0A0U1RQE8 302 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 TRIM43BA6NCK2 446 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 GRM6O15303 877 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 RAD51BO15315 384 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 GLUD1P00367 558 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 CD1EP15812 388 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 GPX3P22352 226 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 HNF1BP35680 557 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 SPAM1P38567 509 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 ERFP50548 548 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 HTRA4P83105 476 aaPredicted RBP11.17□□□□□ -0.62
CLPX-204ENST00000559152 TGFBIQ15582 683 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 RBBP7Q16576 425 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 LRRC26Q2I0M4 334 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 PITRM1Q5JRX3 1037 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 SAMD4BQ5PRF9 694 aaKnown RBP11.17□□□□□ -0.62
CLPX-204ENST00000559152 FAM151BQ6UXP7 276 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 SPNS2Q8IVW8 549 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 MYO1HQ8N1T3 1032 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 PPP2R3CQ969Q6 453 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 TRIM43Q96BQ3 446 aaPredicted RBP11.17□□□□□ -0.62
CLPX-204ENST00000559152 EID2BQ96D98 161 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 C3orf30Q96M34 536 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 NSUN5Q96P11 429 aaKnown RBP11.17□□□□□ -0.62
CLPX-204ENST00000559152 ZNF382Q96SR6 550 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 SLC30A3Q99726 388 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 CORO1BQ9BR76 489 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 HTATIP2Q9BUP3 242 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 SLC46A2Q9BY10 475 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 IL23AQ9NPF7 189 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 SLC25A13Q9UJS0 675 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 HS3ST2Q9Y278 367 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms