RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 ZNF592Q92610 1267 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 TRIM44Q96DX7 344 aaPredicted RBP11.31□□□□□ -0.6
SNX1-204ENST00000559061 MFSD3Q96ES6 412 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 SIGLEC10Q96LC7 697 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 FCRL3Q96P31 734 aaPredicted RBP11.31□□□□□ -0.6
SNX1-204ENST00000559061 BOCQ9BWV1 1114 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 TRIM39Q9HCM9 518 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 NLGN3Q9NZ94 848 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 MARCH4Q9P2E8 410 aaPredicted RBP11.31□□□□□ -0.6
SNX1-204ENST00000559061 ASIC3Q9UHC3 531 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 CSNK1G3Q9Y6M4 447 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 ASXL3Q9C0F0 2248 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 HEATR9A2RTY3 570 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 A6NCN8 305 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 NOBOXO60393 691 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 SLC25A14O95258 325 aaPredicted RBP11.3□□□□□ -0.6
SNX1-204ENST00000559061 GOT2P00505 430 aaKnown RBP11.3□□□□□ -0.6
SNX1-204ENST00000559061 TNFP01375 233 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 F7P08709 466 aaPredicted RBP11.3□□□□□ -0.6
SNX1-204ENST00000559061 MLNP12872 115 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 KELP23276 732 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 ID4P47928 161 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 ARCN1P48444 511 aaKnown RBP11.3□□□□□ -0.6
SNX1-204ENST00000559061 NOVA1P51513 510 aaKnown RBP11.3□□□□□ -0.6
SNX1-204ENST00000559061 ITGA8P53708 1063 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 CTBSQ01459 385 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 DNAJC3Q13217 504 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 PUM1Q14671 1186 aaKnown RBP eCLIP11.3□□□□□ -0.6
SNX1-204ENST00000559061 SMAD1Q15797 465 aaKnown RBP11.3□□□□□ -0.6
SNX1-204ENST00000559061 DBN1Q16643 649 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 PCID2Q5JVF3 399 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 ZDHHC20Q5W0Z9 365 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 DUPD1Q68J44 220 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 SYDE1Q6ZW31 735 aaPredicted RBP11.3□□□□□ -0.6
SNX1-204ENST00000559061 SNX20Q7Z614 316 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 SLCO6A1Q86UG4 719 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 C17orf82Q86X59 251 aaPredicted RBP11.3□□□□□ -0.6
SNX1-204ENST00000559061 PHYKPLQ8IUZ5 450 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 SLC35F3Q8IY50 421 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 NXPE1Q8N323 547 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 KYQ8NBH2 561 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 SETD7Q8WTS6 366 aaKnown RBP11.3□□□□□ -0.6
SNX1-204ENST00000559061 HDAC10Q969S8 669 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 APOLD1Q96LR9 279 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 OR2M4Q96R27 311 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 SLC13A1Q9BZW2 595 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 IL22Q9GZX6 179 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 ASB8Q9H765 288 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 MRM3Q9HC36 420 aaKnown RBP11.3□□□□□ -0.6
SNX1-204ENST00000559061 SPATS2LQ9NUQ6 558 aaKnown RBP11.3□□□□□ -0.6
SNX1-204ENST00000559061 IL1RAPL1Q9NZN1 696 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 SPASTQ9UBP0 616 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 SOX13Q9UN79 622 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 SNX24Q9Y343 169 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 PRSS21Q9Y6M0 314 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 RP1P56715 2156 aa11.3□□□□□ -0.6
SNX1-204ENST00000559061 ZCWPW2A0A1B0GU75 182 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 H3BM21 787 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 TPP1O14773 563 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 ACRV1P26436 265 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 NPY2RP49146 381 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 ACADVLP49748 655 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 PDE1BQ01064 536 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 TMEM115Q12893 351 aaPredicted RBP11.29□□□□□ -0.6
SNX1-204ENST00000559061 WHAMMP3Q1A5X7 153 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 PLA2G4EQ3MJ16 856 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 C6orf132Q5T0Z8 1188 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 CRTC3Q6UUV7 619 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 ZDHHC24Q6UX98 284 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 FAM83HQ6ZRV2 1179 aaPredicted RBP11.29□□□□□ -0.6
SNX1-204ENST00000559061 LDB1Q86U70 411 aaPredicted RBP11.29□□□□□ -0.6
SNX1-204ENST00000559061 HOOK3Q86VS8 718 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 SPNS2Q8IVW8 549 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 UNC5BQ8IZJ1 945 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 FSTL5Q8N475 847 aaPredicted RBP11.29□□□□□ -0.6
SNX1-204ENST00000559061 BEND7Q8N7W2 519 aaPredicted RBP11.29□□□□□ -0.6
SNX1-204ENST00000559061 FAM181AQ8N9Y4 354 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 RHBDD1Q8TEB9 315 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 PATE1Q8WXA2 126 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 SGSM3Q96HU1 749 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 RUNDC3BQ96NL0 473 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 TRIM31Q9BZY9 425 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 TRNAU1APQ9NX07 287 aaKnown RBP11.29□□□□□ -0.6
SNX1-204ENST00000559061 RABGEF1Q9UJ41 708 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 MOSPD1Q9UJG1 213 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 WASF3Q9UPY6 502 aa11.29□□□□□ -0.6
SNX1-204ENST00000559061 GOLGA4Q13439 2230 aaKnown RBP11.28□□□□□ -0.6
SNX1-204ENST00000559061 FAM187AA6NFU0 413 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 GRID2O43424 1007 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 VEGFDO43915 354 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 OR1I1O60431 355 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 ASMTLO95671 621 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 TOP3BO95985 862 aaKnown RBP11.28□□□□□ -0.6
SNX1-204ENST00000559061 ACP5P13686 325 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 CEACAM1P13688 526 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 HADHAP40939 763 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 BLKP51451 505 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 CLDN6P56747 220 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 CACNG1Q06432 222 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 DHX9Q08211 1270 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms