RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 PAPD4Q6PIY7 484 aaKnown RBP4.39□□□□□ -1.71
CASC4-206ENST00000558847 SLC36A4Q6YBV0 504 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 CLEC17AQ6ZS10 378 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 INTS8Q75QN2 995 aaKnown RBP4.39□□□□□ -1.71
CASC4-206ENST00000558847 AFAP1Q8N556 730 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 OR14A16Q8NHC5 309 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 THAP6Q8TBB0 222 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 OIT3Q8WWZ8 545 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 ORAI1Q96D31 301 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 HMCESQ96FZ2 354 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 URB1-AS1Q96HZ7 61 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 TXNDC15Q96J42 360 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 SPAG5Q96R06 1193 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 DCLK3Q9C098 648 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 SLCO5A1Q9H2Y9 848 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 KCNK15Q9H427 330 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 ZCCHC17Q9NP64 241 aaKnown RBP4.39□□□□□ -1.71
CASC4-206ENST00000558847 MCM9Q9NXL9 1143 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 ELOVL5Q9NYP7 299 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 SLC9A2Q9UBY0 812 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 TSPYL4Q9UJ04 414 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 HACL1Q9UJ83 578 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 ARHGEF40Q8TER5 1519 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 TMEM8BA6NDV4 472 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 NDUFS4O43181 175 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 RGS14O43566 566 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 SERPINI2O75830 405 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 PSG1P11464 419 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 TNFRSF1BP20333 461 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 CDC25AP30304 524 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 CCR3P51677 355 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 SUOXP51687 545 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 CSE1LP55060 971 aaKnown RBP4.38□□□□□ -1.71
CASC4-206ENST00000558847 TAS2R38P59533 333 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 IRX6P78412 446 aaPredicted RBP4.38□□□□□ -1.71
CASC4-206ENST00000558847 TFCP2Q12800 502 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 GAGE2BQ13066 116 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 GPS2Q13227 327 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 EFNB3Q15768 340 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 SNAPC1Q16533 368 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 GAGE2EQ4V326 116 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 CBWD6Q4V339 395 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 ATP13A5Q4VNC0 1218 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 TDRD12Q587J7 1177 aaKnown RBP4.38□□□□□ -1.71
CASC4-206ENST00000558847 CBWD3Q5JTY5 395 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 ARMC4Q5T2S8 1044 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 GAGE2AQ6NT46 116 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 GPR180Q86V85 440 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 EMC1Q8N766 993 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 NRACQ8N912 160 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 OR10S1Q8NGN2 331 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 PPP4R1Q8TF05 950 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 FAM216AQ8WUB2 273 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 HDAC11Q96DB2 347 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 MTBPQ96DY7 904 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 NEK1Q96PY6 1258 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 MOV10L1Q9BXT6 1211 aaKnown RBP4.38□□□□□ -1.71
CASC4-206ENST00000558847 RAD21L1Q9H4I0 556 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 PCDH9Q9HC56 1237 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 LARSQ9P2J5 1176 aaKnown RBP4.38□□□□□ -1.71
CASC4-206ENST00000558847 GAGE2DQ9UEU5 116 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 ANAPC5Q9UJX4 755 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 LOXL2Q9Y4K0 774 aa4.38□□□□□ -1.71
CASC4-206ENST00000558847 A0A0U1RQJ8 604 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 B4DGG1 531 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 CCER2I3L3R5 266 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 TNFRSF13BO14836 293 aaPredicted RBP4.37□□□□□ -1.71
CASC4-206ENST00000558847 PLRG1O43660 514 aaKnown RBP4.37□□□□□ -1.71
CASC4-206ENST00000558847 HSPA4LO95757 839 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 SRCP12931 536 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 HOXB2P14652 356 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 ERCC2P18074 760 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 UGT1A1P22309 533 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 CPT2P23786 658 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 COMPP49747 757 aaPredicted RBP4.37□□□□□ -1.71
CASC4-206ENST00000558847 RAB28P51157 221 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 TRAF1Q13077 416 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 HNF4GQ14541 408 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 IL11RAQ14626 422 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 COG2Q14746 738 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 NR1D2Q14995 579 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 MEP1AQ16819 746 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 ALDH1L2Q3SY69 923 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 ZNF628Q5EBL2 1059 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 TMEM198Q66K66 360 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 LCN10Q6JVE6 187 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 CCNI2Q6ZMN8 369 aaPredicted RBP4.37□□□□□ -1.71
CASC4-206ENST00000558847 AACSQ86V21 672 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 THNSL1Q8IYQ7 743 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 MAML2Q8IZL2 1156 aaPredicted RBP4.37□□□□□ -1.71
CASC4-206ENST00000558847 BEST3Q8N1M1 668 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 GCSAMQ8N6F7 178 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 PCDH20Q8N6Y1 951 aaKnown RBP4.37□□□□□ -1.71
CASC4-206ENST00000558847 TC2NQ8N9U0 490 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 VPS33AQ96AX1 596 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 QRFPRQ96P65 431 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 GBP5Q96PP8 586 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 CDRT15Q96T59 188 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 DDOQ99489 341 aa4.37□□□□□ -1.71
CASC4-206ENST00000558847 ADPGKQ9BRR6 497 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms