RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ACOX2Q99424 681 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 PCGF1Q9BSM1 259 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 LTB4R2Q9NPC1 389 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.92□□□□□ -1.78
VRK1-207ENST00000557352 TBX20Q9UMR3 447 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 PTPRGP23470 1445 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 FGD6Q6ZV73 1430 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 AKNAQ7Z591 1439 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 ATP10BO94823 1461 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 ABCC10Q5T3U5 1492 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 ABCA9Q8IUA7 1624 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 MTUS2Q5JR59 1369 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 CCNB3Q8WWL7 1395 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 LRRC53A6NM62 1247 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 POLBP06746 335 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 ERVK-10P10266 1014 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 HSD3B1P14060 373 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 ZNF23P17027 643 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 ABCD1P33897 745 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 AHRP35869 848 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 CPOXP36551 454 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 VAMP2P63027 116 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 COG7P83436 770 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 ARHGEF5Q12774 1597 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 BAK1Q16611 211 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 GSTA3Q16772 222 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 MYLK3Q32MK0 819 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 CYP26C1Q6V0L0 522 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 TRPT1Q86TN4 253 aaKnown RBP3.91□□□□□ -1.78
VRK1-207ENST00000557352 ADSSL1Q8N142 457 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 SPEM1Q8N4L4 309 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 ANKRD42Q8N9B4 389 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 SLC44A1Q8WWI5 657 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 TMEM190Q8WZ59 177 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 IGSF8Q969P0 613 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 LRR1Q96L50 414 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 UBXN10Q96LJ8 280 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 CFAP74Q9C0B2 1584 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 PPCSQ9HAB8 311 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 VEZTQ9HBM0 779 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 SLC52A3Q9NQ40 469 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 ASAH2Q9NR71 780 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 TCP11L1Q9NUJ3 509 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 MARCH4Q9P2E8 410 aaPredicted RBP3.91□□□□□ -1.78
VRK1-207ENST00000557352 SARDHQ9UL12 918 aa3.91□□□□□ -1.78
VRK1-207ENST00000557352 MAPKBP1O60336 1514 aa3.9□□□□□ -1.78
VRK1-207ENST00000557352 MAST1Q9Y2H9 1570 aa3.9□□□□□ -1.78
VRK1-207ENST00000557352 HHLA1C9JL84 531 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 FAM90A26D6RGX4 464 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 CIDEAO60543 219 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 BAG4O95429 457 aaKnown RBP3.9□□□□□ -1.79
VRK1-207ENST00000557352 PRSS56P0CW18 603 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 UBA7P41226 1012 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 KRTAP10-3P60369 221 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 PTP4A2Q12974 167 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 TRPC3Q13507 836 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 TECRLQ5HYJ1 363 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 FAM53AQ6NSI3 398 aaPredicted RBP3.9□□□□□ -1.79
VRK1-207ENST00000557352 PLEKHM3Q6ZWE6 761 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 ANKRD9Q96BM1 317 aaPredicted RBP3.9□□□□□ -1.79
VRK1-207ENST00000557352 HVCN1Q96D96 273 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 ARHGEF26Q96DR7 871 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 ZNF599Q96NL3 588 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 LRMDAQ9H2I8 198 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 KIF9Q9HAQ2 790 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 HAO1Q9UJM8 370 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 RIMBP3CA6NJZ7 1639 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 RIMBP3BA6NNM3 1639 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 RIMBP3Q9UFD9 1639 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 SHANK2Q9UPX8 1470 aa3.9□□□□□ -1.79
VRK1-207ENST00000557352 TTC37Q6PGP7 1564 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 TP53BP1Q12888 1972 aaPredicted RBP3.89□□□□□ -1.79
VRK1-207ENST00000557352 FAM237AA0A1B0GTK4 181 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 C5orf60A6NFR6 353 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 NR5A2O00482 541 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 HS3ST1O14792 307 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 ANKRD28O15084 1053 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 KCNN4O15554 427 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 TNFSF14O43557 240 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 CAVIN2O95810 425 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 CSF2RAP15509 400 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 GNB3P16520 340 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 UGT1A1P22309 533 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 HOXC8P31273 242 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 HOXC9P31274 260 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 NEXNQ0ZGT2 675 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 MAD2L1Q13257 205 aaPredicted RBP3.89□□□□□ -1.79
VRK1-207ENST00000557352 PIWIL4Q7Z3Z4 852 aaKnown RBP3.89□□□□□ -1.79
VRK1-207ENST00000557352 ASCL2Q99929 193 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 USP44Q9H0E7 712 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 PRKRIP1Q9H875 184 aaPredicted RBP3.89□□□□□ -1.79
VRK1-207ENST00000557352 SLC28A3Q9HAS3 691 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 GGA3Q9NZ52 723 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 INTS6Q9UL03 887 aaKnown RBP3.89□□□□□ -1.79
VRK1-207ENST00000557352 C2CD2Q9Y426 696 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.89□□□□□ -1.79
VRK1-207ENST00000557352 CACNA1FO60840 1977 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 PLXNC1O60486 1568 aa3.89□□□□□ -1.79
VRK1-207ENST00000557352 ADGRL2O95490 1459 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 PLEKHH2Q8IVE3 1493 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms